iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095623

Ensembl Protein ID

PP1S37_345V6.1

UniProt Accession

A9RZJ3; A9RZJ3_PHYPA

Genbank Protein ID

EDQ75751.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544926

Gene Name

PHYPADRAFT_161968

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S37_345V6	PP1S37_345V6.1	PP1S37_345V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.70e-07	29.7	269	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           +++ ++a   d +++ +Gs+ g + ++D+rtg 
   Q: 269  SPIKSIAPgGDgNTVYVGSGSGDLACFDMRTGQ 301
           78999998844577777777777*******996 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MPRTNSVDLP GCPPFRALCC DNLGYVKVVE VASDKGMPQV VARWGRDPVA CSAYGEEGFA 60
LARKSGRVEV LNPVNGVRLA EVVVPTSISE RVNGNREDAS DAVCGLHLFK KNSIWGTAVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAGGGTT TTAGGGTTTT AGGGTTACTA CAGCGAGACA GGGAGAGAGC GTGGGGGTTG 60
GGCCATCTTC CAGTCACGGA GGGGGGCTTG TTCTACCACT TTGTTAGTTA GTTAGTTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0030687--C:preribosome, large subunit precursor
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

ppp:PHYPADRAFT_161968

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000787	Aegilops tauschii	43.70	6.00e-82	297.00
IUUC-Aml-001460	Ailuropoda melanoleuca	34.96	1.00e-31	129.00
IUUC-Atr-002657	Amborella trichopoda	47.06	3.00e-93	334.00
IUUC-Aly-006380	Arabidopsis lyrata	44.00	1.00e-81	296.00
IUUC-Ath-007686	Arabidopsis thaliana	44.27	1.00e-82	299.00
IUUC-Ame-011942	Astyanax mexicanus	36.62	3.00e-30	125.00
IUUC-Bta-013382	Bos taurus	39.32	4.00e-32	131.00
IUUC-Bdi-014280	Brachypodium distachyon	42.24	4.00e-85	307.00
IUUC-Bra-017855	Brassica rapa	44.80	1.00e-84	306.00
IUUC-Cja-018933	Callithrix jacchus	36.18	6.00e-32	130.00
IUUC-Cfa-020634	Canis familiaris	36.78	1.00e-31	129.00
IUUC-Cpo-022089	Cavia porcellus	34.26	1.00e-29	123.00
IUUC-Csa-023835	Chlorocebus sabaeus	40.00	2.00e-30	125.00
IUUC-Cho-024385	Choloepus hoffmanni	42.37	5.00e-07	47.00
IUUC-Cin-025691	Ciona intestinalis	35.45	1.00e-27	116.00
IUUC-Dre-028473	Danio rerio	41.18	1.00e-35	142.00
IUUC-Dno-029687	Dasypus novemcinctus	36.25	3.00e-29	121.00
IUUC-Dor-030529	Dipodomys ordii	31.40	3.00e-11	62.40
IUUC-Dme-031982	Drosophila melanogaster	28.72	8.00e-16	77.40
IUUC-Ete-032407	Echinops telfairi	30.00	1.00e-17	83.20
IUUC-Eca-033792	Equus caballus	33.33	2.00e-17	82.40
IUUC-Fca-036584	Felis catus	37.50	2.00e-31	129.00
IUUC-Gmo-039064	Gadus morhua	36.19	9.00e-35	139.00
IUUC-Gac-042170	Gasterosteus aculeatus	41.04	4.00e-32	130.00
IUUC-Gma-044150	Glycine max	45.95	8.00e-91	326.00
IUUC-Ggo-044955	Gorilla gorilla	35.22	9.00e-31	126.00
IUUC-Hsa-046615	Homo sapiens	35.37	1.00e-30	126.00
IUUC-Hvu-047119	Hordeum vulgare	42.56	1.00e-71	263.00
IUUC-Itr-048987	Ictidomys tridecemlineatus	38.42	7.00e-30	124.00
IUUC-Kpa-049188	Komagataella pastoris	29.61	6.00e-17	80.90
IUUC-Lch-050396	Latimeria chalumnae	37.55	2.00e-36	145.00
IUUC-Laf-054015	Loxodonta africana	39.47	2.00e-31	129.00
IUUC-Mcc-055589	Macaca mulatta	40.53	4.00e-31	128.00
IUUC-Meu-056160	Macropus eugenii	38.28	4.00e-16	78.20
IUUC-Mtr-057719	Medicago truncatula	40.78	4.00e-93	334.00
IUUC-Mmr-060801	Microcebus murinus	40.53	3.00e-31	128.00
IUUC-Mdo-062069	Monodelphis domestica	42.19	2.00e-32	132.00
IUUC-Mmu-063487	Mus musculus	40.00	7.00e-30	124.00
IUUC-Mpu-066542	Mustela putorius furo	34.96	4.00e-31	127.00
IUUC-Mlu-067520	Myotis lucifugus	34.18	8.00e-31	127.00
IUUC-Nle-069422	Nomascus leucogenys	35.37	7.00e-31	127.00
IUUC-Opr-070402	Ochotona princeps	31.75	1.00e-15	76.30
IUUC-Ont-072078	Oreochromis niloticus	39.88	9.00e-30	123.00
IUUC-Ocu-073886	Oryctolagus cuniculus	39.47	3.00e-30	125.00
IUUC-Obr-076206	Oryza brachyantha	41.97	8.00e-74	270.00
IUUC-Ogl-077112	Oryza glaberrima	45.60	1.00e-84	305.00
IUUC-Ogu-078172	Oryza glumaepatula	42.32	1.00e-73	270.00
IUUC-Oin-080070	Oryza indica	45.60	2.00e-84	305.00
IUUC-Olo-080534	Oryza longistaminata	42.42	1.00e-72	266.00
IUUC-Ome-081869	Oryza meridionalis	44.42	1.00e-81	296.00
IUUC-Opu-083828	Oryza punctata	44.42	3.00e-82	298.00
IUUC-Oru-084690	Oryza rufipogon	43.07	4.00e-80	291.00
IUUC-Ola-087342	Oryzias latipes	40.00	7.00e-30	123.00
IUUC-Oga-088865	Otolemur garnettii	32.22	1.00e-28	119.00
IUUC-Oar-090030	Ovis aries	40.53	6.00e-32	130.00
IUUC-Pan-092461	Papio anubis	40.53	4.00e-31	127.00
IUUC-Psi-093061	Pelodiscus sinensis	44.63	3.00e-33	135.00
IUUC-Pma-094281	Petromyzon marinus	32.58	8.00e-31	127.00
IUUC-Pfo-097074	Poecilia formosa	39.31	9.00e-26	110.00
IUUC-Pab-098290	Pongo abelii	35.37	1.00e-30	126.00
IUUC-Pop-099602	Populus trichocarpa	49.19	1.00e-96	345.00
IUUC-Pca-100383	Procavia capensis	37.86	1.00e-29	123.00
IUUC-Ppe-101867	Prunus persica	45.91	3.00e-87	315.00
IUUC-Pva-103218	Pteropus vampyrus	27.52	3.00e-10	58.50
IUUC-Rno-105494	Rattus norvegicus	38.83	7.00e-31	127.00
IUUC-Sha-107127	Sarcophilus harrisii	41.67	5.00e-32	130.00
IUUC-Sit-110466	Setaria italica	43.48	7.00e-77	280.00
IUUC-Sbi-113854	Sorghum bicolor	46.67	2.00e-83	302.00
IUUC-Ssc-116144	Sus scrofa	35.77	5.00e-32	131.00
IUUC-Tru-118516	Takifugu rubripes	33.82	1.00e-33	136.00
IUUC-Tni-120527	Tetraodon nigroviridis	38.73	5.00e-30	124.00
IUUC-Tae-123391	Triticum aestivum	43.61	3.00e-86	311.00
IUUC-Tur-126054	Triticum urartu	45.29	7.00e-73	267.00
IUUC-Tbe-127232	Tupaia belangeri	25.71	2.00e-13	69.70
IUUC-Ttr-128529	Tursiops truncatus	39.47	6.00e-30	124.00
IUUC-Vpa-130703	Vicugna pacos	42.98	4.00e-20	91.70
IUUC-Vvi-131680	Vitis vinifera	45.25	1.00e-93	335.00
IUUC-Xtr-132802	Xenopus tropicalis	27.98	2.00e-14	72.40
IUUC-Xma-133396	Xiphophorus maculatus	30.06	7.00e-16	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence