iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s12590	POPTR_0002s12590.2	POPTR_0002s12590.2
POPTR_0002s12590	POPTR_0002s12590.1	POPTR_0002s12590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-06	27.4	718	759

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   +d + +l+CgH fha C+++w     +  k++ CP+C+
   Q: 718  CCICQEEYndgED-LGTLDCGHDFHAGCVKQW-----LMHKNW-CPICK 759
           ********55444.8899**************.....556666.****6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQGQRSIIGS LPETLDFDHG STSGNAIIDQ QICLSNMRNP AENRLTEFML SPSRMNNPYA 60
NSIDQERQNL SGWSLGEPSS SGQQNQASHD DRKLEHGWSS SASSSAGAGP RLEERRYEPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCATATCTC ATATCCTCCT CCTCCTCTTC CCTTCTCCCC CTCTCTCACG CTCTCTCTCT 60
CCCCCCCTCT CTCTCTCCTT TCTTTCGGTG AGGGTTTTGT TTTTATTTAT TTTTCTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s12590g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001791	Ailuropoda melanoleuca	39.39	1.00e-14	73.20
IUUC-Aca-005299	Anolis carolinensis	41.41	1.00e-14	73.60
IUUC-Aly-005944	Arabidopsis lyrata	36.36	4.00e-102	364.00
IUUC-Ath-007036	Arabidopsis thaliana	34.70	3.00e-81	295.00
IUUC-Ame-011948	Astyanax mexicanus	40.82	2.00e-15	76.30
IUUC-Bta-012470	Bos taurus	39.39	3.00e-14	72.40
IUUC-Bdi-014368	Brachypodium distachyon	58.92	4.00e-56	212.00
IUUC-Bol-015592	Brassica oleracea	31.82	4.00e-69	255.00
IUUC-Cja-019798	Callithrix jacchus	42.42	3.00e-15	75.50
IUUC-Cfa-020297	Canis familiaris	39.39	2.00e-14	72.80
IUUC-Cpo-022225	Cavia porcellus	42.42	3.00e-15	75.50
IUUC-Csa-024018	Chlorocebus sabaeus	42.42	2.00e-15	75.50
IUUC-Dre-028365	Danio rerio	40.82	6.00e-15	74.30
IUUC-Dno-029962	Dasypus novemcinctus	39.39	3.00e-14	72.00
IUUC-Eca-033911	Equus caballus	39.39	1.00e-14	73.20
IUUC-Fca-035641	Felis catus	39.39	2.00e-14	73.20
IUUC-Gmo-039613	Gadus morhua	38.78	8.00e-15	73.60
IUUC-Gac-042544	Gasterosteus aculeatus	41.84	3.00e-15	75.10
IUUC-Gma-042748	Glycine max	48.97	1.00e-161	562.00
IUUC-Ggo-044631	Gorilla gorilla	42.42	3.00e-15	75.50
IUUC-Hsa-046864	Homo sapiens	42.42	2.00e-15	75.50
IUUC-Itr-048602	Ictidomys tridecemlineatus	42.42	3.00e-15	75.50
IUUC-Lch-049656	Latimeria chalumnae	40.40	6.00e-14	71.20
IUUC-Loc-052046	Lepisosteus oculatus	41.41	5.00e-16	77.80
IUUC-Laf-053554	Loxodonta africana	39.39	5.00e-14	69.70
IUUC-Mcc-055198	Macaca mulatta	42.42	2.00e-15	75.90
IUUC-Mtr-057649	Medicago truncatula	47.11	1.00e-145	509.00
IUUC-Mmr-061389	Microcebus murinus	39.39	2.00e-14	72.40
IUUC-Mdo-062317	Monodelphis domestica	40.40	2.00e-14	72.40
IUUC-Mmu-063102	Mus musculus	42.42	2.00e-15	76.30
IUUC-Mpu-066793	Mustela putorius furo	39.39	2.00e-14	72.40
IUUC-Mlu-067464	Myotis lucifugus	34.58	6.00e-11	62.80
IUUC-Nle-069235	Nomascus leucogenys	42.42	4.00e-15	75.50
IUUC-Opr-070646	Ochotona princeps	39.39	2.00e-14	72.40
IUUC-Ont-072005	Oreochromis niloticus	43.30	1.00e-16	80.10
IUUC-Oan-072924	Ornithorhynchus anatinus	39.39	2.00e-13	69.70
IUUC-Ocu-074718	Oryctolagus cuniculus	42.42	2.00e-15	75.90
IUUC-Ola-087046	Oryzias latipes	42.86	8.00e-16	77.00
IUUC-Oga-087993	Otolemur garnettii	42.42	2.00e-15	76.30
IUUC-Oar-089588	Ovis aries	39.39	2.00e-14	72.80
IUUC-Ptr-091341	Pan troglodytes	42.42	2.00e-15	75.50
IUUC-Pan-091775	Papio anubis	42.42	2.00e-15	75.50
IUUC-Pfo-096103	Poecilia formosa	42.86	9.00e-16	77.00
IUUC-Pab-097885	Pongo abelii	38.54	5.00e-13	69.70
IUUC-Pca-100561	Procavia capensis	35.24	3.00e-12	67.00
IUUC-Ppe-101513	Prunus persica	56.81	0.00e+00	739.00
IUUC-Pva-102801	Pteropus vampyrus	41.41	5.00e-15	74.70
IUUC-Rno-105973	Rattus norvegicus	42.42	2.00e-15	76.30
IUUC-Sha-107027	Sarcophilus harrisii	39.39	8.00e-14	70.90
IUUC-Sly-111039	Solanum lycopersicum	42.91	4.00e-127	447.00
IUUC-Stu-112006	Solanum tuberosum	40.30	1.00e-111	396.00
IUUC-Sar-113383	Sorex araneus	39.39	2.00e-14	72.40
IUUC-Ssc-116357	Sus scrofa	39.39	2.00e-14	72.40
IUUC-Tru-118133	Takifugu rubripes	42.86	2.00e-15	76.30
IUUC-Tni-120104	Tetraodon nigroviridis	43.30	1.00e-16	79.70
IUUC-Tca-121625	Theobroma cacao	52.84	0.00e+00	645.00
IUUC-Vpa-130177	Vicugna pacos	39.39	4.00e-14	70.50
IUUC-Vvi-131306	Vitis vinifera	56.44	0.00e+00	692.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence