iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110862

Ensembl Protein ID

Solyc06g063110.1.1

UniProt Accession

K4C742; K4C742_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g063110.1	Solyc06g063110.1.1	Solyc06g063110.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-07	32.4	114	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+d ++g   ++lp C+H fh dC+ +w       + + +CPlCr
   Q: 114  CAVCLCDVSEGemARLLPkCNHGFHVDCIDMW------LQSHSTCPLCR 156
           ********77666888999*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MADVLQNNGK LDDPSMIELT GKILVVAVIV LFLVLMLVFF LHLYSKWFWN QRRQADNHRN 60
AATRQRRRRR RFDFSPGHEV NVTSVLNRGL DPVLLKTIPV VLFDPEEFKD GLECAVCLCD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGATG TTTTGCAGAA CAATGGTAAA CTGGATGATC CAAGTATGAT TGAGCTCACA 60
GGGAAAATAC TAGTGGTAGC AGTCATAGTT CTCTTTCTTG TATTGATGTT AGTCTTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101254104

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000301	Aegilops tauschii	41.94	6.00e-21	92.80
IUUC-Aly-005421	Arabidopsis lyrata	38.44	2.00e-42	165.00
IUUC-Ath-006957	Arabidopsis thaliana	38.51	4.00e-40	157.00
IUUC-Bdi-014880	Brachypodium distachyon	45.45	3.00e-27	115.00
IUUC-Bol-015610	Brassica oleracea	39.45	5.00e-33	134.00
IUUC-Gma-044235	Glycine max	45.70	6.00e-50	190.00
IUUC-Hvu-047333	Hordeum vulgare	51.33	1.00e-31	129.00
IUUC-Mtr-058409	Medicago truncatula	49.33	4.00e-45	174.00
IUUC-Mac-065123	Musa acuminata	39.57	6.00e-38	150.00
IUUC-Oba-074984	Oryza barthii	56.82	2.00e-25	108.00
IUUC-Obr-076471	Oryza brachyantha	43.59	3.00e-21	94.00
IUUC-Ogl-077250	Oryza glaberrima	56.82	2.00e-25	108.00
IUUC-Ogu-078929	Oryza glumaepatula	53.06	1.00e-25	109.00
IUUC-Oin-079559	Oryza indica	56.82	2.00e-25	108.00
IUUC-Oni-082758	Oryza nivara	56.82	1.00e-25	109.00
IUUC-Oru-084427	Oryza rufipogon	56.82	2.00e-25	108.00
IUUC-Osa-086236	Oryza sativa	56.82	2.00e-25	108.00
IUUC-Pop-099297	Populus trichocarpa	50.98	7.00e-40	156.00
IUUC-Sit-110093	Setaria italica	55.17	4.00e-23	100.00
IUUC-Stu-112429	Solanum tuberosum	90.57	3.00e-114	403.00
IUUC-Tca-121232	Theobroma cacao	47.78	9.00e-50	189.00
IUUC-Tae-123453	Triticum aestivum	50.93	2.00e-29	122.00
IUUC-Tur-126264	Triticum urartu	49.07	3.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence