iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058669

Ensembl Protein ID

KEH31949

UniProt Accession

A0A072UQ59; A0A072UQ59_MEDTR

Genbank Protein ID

KEH31949.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g108830

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g108830	KEH31949	KEH31949
MTR_4g108830	KEH31948	KEH31948

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.8	174	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+d+   +  ++lp C H+fh+ C+ kw        k+++CP+Cr
   Q: 174  CAICLQDIevGEVARSLPrCDHTFHLICVDKW------LVKNDSCPICR 216
           ********66444778888*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

METGGRNETP FLGFRFVSKF LLCAVSGTLT ACFAFAGALT GAIAGALAAK ATKSGFLRGV 60
SLGAIAGAIL SVEVLEASRA YWCMEQTGSR GASSMADFIE ELVRGRLVEE SLTPAILTAY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACTG GTGGACGAAA CGAAACACCC TTCTTGGGTT TTCGTTTTGT CTCCAAATTT 60
CTATTATGCG CCGTATCTGG AACTCTCACC GCATGTTTTG CCTTTGGTAA TTTTTTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0010200--P:response to chitin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000628	Aegilops tauschii	47.40	2.00e-37	147.00
IUUC-Ath-007375	Arabidopsis thaliana	55.92	4.00e-47	180.00
IUUC-Bdi-014618	Brachypodium distachyon	50.00	3.00e-40	157.00
IUUC-Gma-043588	Glycine max	84.02	2.00e-90	324.00
IUUC-Lpe-051393	Leersia perrieri	52.63	7.00e-41	159.00
IUUC-Oba-075137	Oryza barthii	46.05	2.00e-34	138.00
IUUC-Obr-076442	Oryza brachyantha	52.63	1.00e-41	163.00
IUUC-Ogl-077830	Oryza glaberrima	53.29	1.00e-41	162.00
IUUC-Ogu-078610	Oryza glumaepatula	52.74	7.00e-39	152.00
IUUC-Oin-079594	Oryza indica	53.29	1.00e-41	162.00
IUUC-Olo-080783	Oryza longistaminata	43.33	6.00e-31	126.00
IUUC-Ome-081475	Oryza meridionalis	47.37	6.00e-36	143.00
IUUC-Oni-082244	Oryza nivara	52.74	6.00e-39	153.00
IUUC-Opu-083541	Oryza punctata	43.79	2.00e-33	135.00
IUUC-Oru-085125	Oryza rufipogon	52.74	6.00e-39	153.00
IUUC-Osa-086024	Oryza sativa	53.29	1.00e-41	162.00
IUUC-Smo-109575	Selaginella moellendorffii	48.33	6.00e-36	143.00
IUUC-Sit-109747	Setaria italica	49.68	7.00e-41	159.00
IUUC-Sbi-114059	Sorghum bicolor	53.25	5.00e-43	166.00
IUUC-Tca-121623	Theobroma cacao	64.67	2.00e-47	181.00
IUUC-Tae-125941	Triticum aestivum	49.34	2.00e-39	154.00
IUUC-Tur-126124	Triticum urartu	48.05	6.00e-37	146.00
IUUC-Vvi-131189	Vitis vinifera	57.47	4.00e-50	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence