• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP
  • SNP
    • dbSNP
  • mRNA Expression
    • GEO
  • DNA & RNA Element
    • TRANSFAC
  • PPI
    • Mentha
  • Proteomics

Tag Content
UUCD2 ID IUUC-Zma-135228
UUCD1 version UUC-ZeM-00290
Ensembl Protein ID Zm00001d049736_T001
UniProt Accession B6SV09; B6SV09_MAIZE
Genbank Protein ID ACG28692.1; ACL53125.1; AIB05353.1; AQK51247.1
Protein Name PHD transcription factor; PHD-finger family protein; RING/FYVE/PHD-type zinc finger family protein
Genbank Nucleotide ID EU956574; BT054518; KJ727862; CM000780
Gene Name PHD13; ZEAMMB73_Zm00001d049736
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d049736 Zm00001d049736_T002 Zm00001d049736_T002
Zm00001d049736 Zm00001d049736_T007 Zm00001d049736_T007
Zm00001d049736 Zm00001d049736_T008 Zm00001d049736_T008
Zm00001d049736 Zm00001d049736_T001 Zm00001d049736_T001
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 2.70e-22 80.7 307 353
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
    +C+ Cg++ ++ k + C++C+ ++H+ Clkl+++ee p + w+Cp C
   Q: 307 ICKDCGRKADS-KGRIICDRCEAAYHVSCLKLAIDEEAPAK--WYCPTCV 353
    56667777664.4899*************************..******7 PP
   

Organism Zea mays
Protein Sequence
(Fasta)
MASDGAPRGR RPKRPASGGL VQPDVLTYKR RRRGTGANAG HSAVTSGPDP DPVKNQMSAV 60
VHATNSQQGG RQTLDRHWRS WRDTLEGVLR STAVNQSAGG IQNCIRDALR YNGWHPTEHG 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Zma-135228|E3,PHD|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTCTAGACAA ACCTCACTCT TTCAATCCAT CCAAGAGGGA AGTTTTCCAA TAATTTAACC 60
TAGCTGTGTG GTGACAGTGG ACGAAGTGTG TGCGGTGTCG AAGGACAAGG TTTTGGCTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Zma-135228|E3,PHD|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG zma:100281389
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005677 Arabidopsis lyrata 32.46 6.00e-57 216.00
IUUC-Ath-007282 Arabidopsis thaliana 33.89 3.00e-59 222.00
IUUC-Cin-025168 Ciona intestinalis 38.36 2.00e-11 62.00
IUUC-Mvi-060531 Microbotryum violaceum 31.86 2.00e-11 64.70
IUUC-Mac-065162 Musa acuminata 46.90 4.00e-89 322.00
IUUC-Ttr-129162 Tursiops truncatus 37.14 2.00e-12 70.10
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved