iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110913

Ensembl Protein ID

Solyc03g120320.1.1

UniProt Accession

K4BMI1; K4BMI1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g120320.1	Solyc03g120320.1.1	Solyc03g120320.1.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	48.62	7.00e-93	337.00	IUUC-Ath-006894

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MELIPTLPYD IGLECLIRVP YNNFSSLTSV SRNWKLQIEL PEFWRRRKAT GSTRQVILMA 60
QARIDPRLKL GSFKYSAFSF YKLTLYEPES GNWAELPPVP GISDGLPMFC QLVGVGLNLV 120

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Nucleotide Sequence
(Fasta)

ATGGAGCTTA TTCCCACTCT TCCTTATGAT ATCGGACTCG AATGTCTAAT TCGAGTTCCT 60
TATAATAATT TCTCGTCACT TACTTCCGTC AGTAGAAACT GGAAGCTTCA GATTGAGCTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1
IPR011498--Kelch_2

Pfam

PF01344--Kelch_1
PF07646--Kelch_2

SMART

SM00612--Kelch

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

sly:104646546

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002518	Amborella trichopoda	40.90	1.00e-75	275.00
IUUC-Aly-006080	Arabidopsis lyrata	48.06	5.00e-98	350.00
IUUC-Ath-006894	Arabidopsis thaliana	48.62	2.00e-100	358.00
IUUC-Ang-009799	Aspergillus niger	25.49	2.20e-01	30.00
IUUC-Bdi-014921	Brachypodium distachyon	41.82	5.00e-80	290.00
IUUC-Bol-015429	Brassica oleracea	50.28	1.00e-98	352.00
IUUC-Bra-017279	Brassica rapa	51.10	3.00e-107	380.00
IUUC-Gma-042989	Glycine max	53.93	8.00e-115	405.00
IUUC-Hvu-047097	Hordeum vulgare	40.27	7.00e-70	256.00
IUUC-Lpe-050853	Leersia perrieri	41.91	3.00e-70	258.00
IUUC-Mor-057181	Magnaporthe oryzae	23.29	6.00e-07	47.80
IUUC-Mtr-058274	Medicago truncatula	49.16	6.00e-102	363.00
IUUC-Mac-065270	Musa acuminata	45.60	2.00e-93	335.00
IUUC-Oba-075850	Oryza barthii	42.01	6.00e-25	107.00
IUUC-Obr-076711	Oryza brachyantha	44.76	9.00e-49	185.00
IUUC-Ogl-077502	Oryza glaberrima	40.63	2.00e-60	225.00
IUUC-Ogu-078360	Oryza glumaepatula	42.27	3.00e-63	234.00
IUUC-Oin-079816	Oryza indica	40.37	3.00e-59	221.00
IUUC-Ome-081176	Oryza meridionalis	41.16	1.00e-69	255.00
IUUC-Oni-082714	Oryza nivara	40.63	2.00e-60	225.00
IUUC-Opu-083272	Oryza punctata	40.05	2.00e-71	261.00
IUUC-Oru-084247	Oryza rufipogon	40.63	8.00e-65	239.00
IUUC-Osa-085360	Oryza sativa	40.63	2.00e-60	225.00
IUUC-Ppa-095543	Physcomitrella patens	33.33	2.00e-48	185.00
IUUC-Pop-099836	Populus trichocarpa	55.77	8.00e-119	419.00
IUUC-Ppe-101539	Prunus persica	57.46	4.00e-126	443.00
IUUC-Smo-109140	Selaginella moellendorffii	40.77	1.00e-56	212.00
IUUC-Sit-110557	Setaria italica	38.54	4.00e-55	207.00
IUUC-Stu-112061	Solanum tuberosum	95.49	0.00e+00	684.00
IUUC-Sbi-114056	Sorghum bicolor	40.00	4.00e-65	241.00
IUUC-Tca-121805	Theobroma cacao	56.86	2.00e-124	437.00
IUUC-Tae-125904	Triticum aestivum	40.05	5.00e-69	254.00
IUUC-Vvi-130895	Vitis vinifera	58.71	2.00e-121	427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence