iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113942

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G239200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g027680	Sb02g027680.1	Sb02g027680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.30e-10	39.7	92	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f  k  +  lpCgH+fh+ Cl+ w     + + +++CPlCr
   Q: 92   CSVCLSGFvaKAVVNRLPCGHLFHRACLETW-----LRYERATCPLCR 134
           ********6544455688*************.....89*********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGISSMPEPR DSLLWYLVVN TVISITALAG LVRKALVFLD LQDDDAGDRL VASAPGLGLA 60
DRFLRAFRPA LYGVLVSTST TCSAAEADGD DCSVCLSGFV AKAVVNRLPC GHLFHRACLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGCTCTGT GTGTGTGCCC ATTCCCCACT CCTCCCGCCG GCCACCCCCA AAAGAATCGG 60
AAATTACAAC CCGGTCCACG GGTCGGATCC CCATCCCCAC CCAAACCAAA TCTAACCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004185--F:serine-type carboxypeptidase activity
GO:0008270--F:zinc ion binding
GO:0051603--P:proteolysis involved in cellular protein catabolic process

KEGG

sbi:SORBI_02g027590

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006955	Arabidopsis thaliana	31.45	2.00e-19	87.80
IUUC-Afl-008560	Aspergillus flavus	37.10	2.00e-09	55.50
IUUC-Aor-009960	Aspergillus oryzae	37.10	2.00e-09	55.50
IUUC-Pgr-103322	Puccinia graminis	33.33	5.00e-10	57.40
IUUC-Sit-110545	Setaria italica	67.90	2.00e-38	152.00
IUUC-Tca-121106	Theobroma cacao	36.67	3.00e-23	99.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence