iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131316

UUCD1 version

UUC-ViV-00003

Ensembl Protein ID

VIT_15s0021g02140.t01

UniProt Accession

D7SLV1; D7SLV1_VITVI

Genbank Protein ID

CBI16629.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594952

Gene Name

RDO4; VIT_15s0021g02140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_15s0021g02140	VIT_15s0021g02140.t01	VIT_15s0021g02140.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-06	26.9	826	864

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+e++k+ ++++ C H+f+  C+q++      + ++ +CP+C
   Q: 826  CGICHERPKE-VVITKCYHLFCNPCVQRI-----IEARNRKCPVC 864
           9*******99.***************999.....5888888**** PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGSTGEPDRK RRHFSSLSPT AATAKKMPFL PVSEDKKLDT AVLQYQNQKL KQKLEAQKVE 60
CSALENKFSQ LKETQQSYNT TLTLVNKTWR ELVDNLETCS VHLKDSASAG RHVKLPSTTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTGGGTTT AAGAGAGAGA AAGAGTAGTT CTCTCTTCTC TGTGAGCTTT AGAGAGAGAG 60
AGAGTTTCAA ATACAGTTTC AGATAGAGAG TGAATTAGGT TGTGAGAAGC TTAGGGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005739--C:mitochondrion
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051301--P:cell division
GO:0016049--P:cell growth
GO:0009817--P:defense response to fungus, incompatible interaction
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0009965--P:leaf morphogenesis
GO:0010389--P:regulation of G2/M transition of mitotic cell cycle
GO:0010162--P:seed dormancy process
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

vvi:100241021

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000994	Aegilops tauschii	39.62	3.00e-150	525.00
IUUC-Aml-002295	Ailuropoda melanoleuca	32.36	3.00e-39	156.00
IUUC-Atr-002836	Amborella trichopoda	57.19	0.00e+00	904.00
IUUC-Apl-003407	Anas platyrhynchos	31.30	2.00e-33	137.00
IUUC-Aca-004850	Anolis carolinensis	30.24	2.00e-34	140.00
IUUC-Aly-006055	Arabidopsis lyrata	56.35	0.00e+00	920.00
IUUC-Ath-007462	Arabidopsis thaliana	55.56	0.00e+00	918.00
IUUC-Ago-007988	Ashbya gossypii	30.52	2.00e-12	67.00
IUUC-Acl-008319	Aspergillus clavatus	40.38	7.00e-10	58.50
IUUC-Ang-009601	Aspergillus niger	42.31	2.00e-10	60.10
IUUC-Aor-010142	Aspergillus oryzae	42.31	4.00e-10	59.30
IUUC-Ate-010547	Aspergillus terreus	42.31	2.00e-10	60.10
IUUC-Ame-011745	Astyanax mexicanus	29.20	8.00e-37	148.00
IUUC-Bgr-012245	Blumeria graminis	41.38	3.00e-10	59.70
IUUC-Bta-013173	Bos taurus	32.09	1.00e-38	154.00
IUUC-Bci-013926	Botrytis cinerea	39.66	2.00e-09	56.60
IUUC-Bdi-014799	Brachypodium distachyon	48.76	0.00e+00	717.00
IUUC-Bol-015421	Brassica oleracea	54.61	0.00e+00	843.00
IUUC-Bra-016664	Brassica rapa	54.76	0.00e+00	847.00
IUUC-Cel-018659	Caenorhabditis elegans	28.74	6.00e-24	105.00
IUUC-Cja-019042	Callithrix jacchus	32.10	6.00e-38	152.00
IUUC-Cfa-020318	Canis familiaris	32.36	3.00e-39	156.00
IUUC-Cpo-021539	Cavia porcellus	32.51	3.00e-38	153.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	40.85	9.00e-13	67.80
IUUC-Csa-024051	Chlorocebus sabaeus	32.10	3.00e-39	156.00
IUUC-Cho-024616	Choloepus hoffmanni	38.24	1.00e-18	87.80
IUUC-Cin-025174	Ciona intestinalis	31.96	1.00e-36	148.00
IUUC-Csv-025830	Ciona savignyi	34.24	3.00e-32	133.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	42.31	7.00e-09	55.10
IUUC-Cne-026878	Cryptococcus neoformans	40.38	5.00e-11	62.40
IUUC-Cme-027134	Cyanidioschyzon merolae	39.73	2.00e-16	79.70
IUUC-Dre-028146	Danio rerio	30.70	1.00e-31	131.00
IUUC-Dno-028892	Dasypus novemcinctus	32.36	3.00e-39	156.00
IUUC-Dor-030268	Dipodomys ordii	32.62	5.00e-39	155.00
IUUC-Dse-031300	Dothistroma septosporum	40.74	2.00e-12	66.60
IUUC-Dme-032034	Drosophila melanogaster	30.03	8.00e-34	138.00
IUUC-Ete-033164	Echinops telfairi	28.65	5.00e-31	129.00
IUUC-Eca-033436	Equus caballus	32.36	3.00e-39	156.00
IUUC-Eeu-034801	Erinaceus europaeus	40.91	2.00e-16	80.50
IUUC-Fca-035720	Felis catus	32.10	1.00e-39	157.00
IUUC-Fal-037622	Ficedula albicollis	40.20	3.00e-19	89.70
IUUC-Fox-038017	Fusarium oxysporum	48.08	3.00e-11	62.80
IUUC-Fso-038414	Fusarium solani	46.15	2.00e-10	60.50
IUUC-Gmo-039269	Gadus morhua	30.42	7.00e-36	145.00
IUUC-Ggr-040117	Gaeumannomyces graminis	37.74	3.00e-10	59.70
IUUC-Gga-040412	Gallus gallus	31.30	3.00e-33	136.00
IUUC-Gac-041303	Gasterosteus aculeatus	31.08	2.00e-36	147.00
IUUC-Gma-042797	Glycine max	63.68	0.00e+00	1058.00
IUUC-Ggo-045426	Gorilla gorilla	32.10	3.00e-39	156.00
IUUC-Hsa-045732	Homo sapiens	31.02	3.00e-39	156.00
IUUC-Hvu-047689	Hordeum vulgare	47.91	0.00e+00	746.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	32.36	3.00e-39	156.00
IUUC-Kpa-049345	Komagataella pastoris	29.13	5.00e-11	62.00
IUUC-Lch-049429	Latimeria chalumnae	29.75	4.00e-37	149.00
IUUC-Lpe-051253	Leersia perrieri	47.35	0.00e+00	704.00
IUUC-Loc-052847	Lepisosteus oculatus	33.82	4.00e-21	94.40
IUUC-Lma-053312	Leptosphaeria maculans	39.29	2.00e-11	63.90
IUUC-Laf-054267	Loxodonta africana	32.36	3.00e-39	156.00
IUUC-Mcc-055240	Macaca mulatta	32.10	3.00e-39	156.00
IUUC-Meu-056750	Macropus eugenii	31.42	1.00e-37	150.00
IUUC-Mor-057068	Magnaporthe oryzae	32.17	2.00e-11	63.50
IUUC-Mpo-057568	Magnaporthe poae	37.74	6.00e-10	58.90
IUUC-Mtr-057632	Medicago truncatula	62.57	0.00e+00	1067.00
IUUC-Mla-059072	Melampsora laricipopulina	23.08	2.00e-17	84.00
IUUC-Mga-059731	Meleagris gallopavo	31.30	1.00e-33	137.00
IUUC-Mvi-060341	Microbotryum violaceum	35.48	7.00e-16	78.60
IUUC-Mmr-061177	Microcebus murinus	32.10	3.00e-39	156.00
IUUC-Mdo-062415	Monodelphis domestica	32.24	6.00e-40	159.00
IUUC-Mmu-063981	Mus musculus	32.36	2.00e-39	156.00
IUUC-Mac-065103	Musa acuminata	55.27	0.00e+00	896.00
IUUC-Mpu-066498	Mustela putorius furo	32.10	1.00e-39	157.00
IUUC-Mlu-067242	Myotis lucifugus	32.36	3.00e-39	156.00
IUUC-Ncr-068695	Neurospora crassa	34.48	2.00e-10	60.50
IUUC-Nle-069058	Nomascus leucogenys	38.24	1.00e-18	88.20
IUUC-Opr-071149	Ochotona princeps	38.24	1.00e-18	88.20
IUUC-Ont-072543	Oreochromis niloticus	29.89	1.00e-28	121.00
IUUC-Oan-072996	Ornithorhynchus anatinus	30.50	3.00e-33	136.00
IUUC-Ocu-073799	Oryctolagus cuniculus	32.36	2.00e-39	157.00
IUUC-Oba-075000	Oryza barthii	46.92	0.00e+00	706.00
IUUC-Obr-076532	Oryza brachyantha	49.72	0.00e+00	751.00
IUUC-Ogl-077200	Oryza glaberrima	49.15	0.00e+00	750.00
IUUC-Ogu-078279	Oryza glumaepatula	49.38	5.00e-167	580.00
IUUC-Oin-079097	Oryza indica	49.04	0.00e+00	748.00
IUUC-Olo-080447	Oryza longistaminata	44.63	3.00e-178	618.00
IUUC-Ome-081304	Oryza meridionalis	48.86	0.00e+00	748.00
IUUC-Oni-082162	Oryza nivara	45.04	0.00e+00	654.00
IUUC-Opu-083812	Oryza punctata	47.87	0.00e+00	654.00
IUUC-Oru-084382	Oryza rufipogon	45.15	0.00e+00	657.00
IUUC-Osa-085839	Oryza sativa	37.70	3.00e-92	332.00
IUUC-Ola-086435	Oryzias latipes	31.69	4.00e-37	149.00
IUUC-Olu-087683	Ostreococcus lucimarinus	33.94	1.00e-15	74.30
IUUC-Oga-089016	Otolemur garnettii	32.10	3.00e-39	156.00
IUUC-Oar-089589	Ovis aries	31.83	6.00e-39	155.00
IUUC-Ptr-091602	Pan troglodytes	38.24	1.00e-18	88.20
IUUC-Pan-092502	Papio anubis	32.10	3.00e-39	156.00
IUUC-Psi-093554	Pelodiscus sinensis	38.24	2.00e-18	87.40
IUUC-Pno-095079	Phaeosphaeria nodorum	44.64	4.00e-12	65.90
IUUC-Ppa-095651	Physcomitrella patens	37.07	2.00e-144	506.00
IUUC-Pfo-097527	Poecilia formosa	31.30	9.00e-29	121.00
IUUC-Pab-098619	Pongo abelii	32.10	4.00e-39	155.00
IUUC-Pop-099376	Populus trichocarpa	70.34	0.00e+00	1185.00
IUUC-Pca-100544	Procavia capensis	32.36	2.00e-39	156.00
IUUC-Ppe-102065	Prunus persica	71.10	0.00e+00	1165.00
IUUC-Pva-102479	Pteropus vampyrus	31.83	7.00e-39	155.00
IUUC-Pgr-103536	Puccinia graminis	50.75	5.00e-17	82.40
IUUC-Pte-104415	Pyrenophora teres	42.86	6.00e-12	65.50
IUUC-Pyt-104762	Pyrenophora triticirepentis	42.86	7.00e-12	65.10
IUUC-Rno-105165	Rattus norvegicus	32.10	2.00e-39	157.00
IUUC-Sce-106384	Saccharomyces cerevisiae	23.74	3.00e-16	79.70
IUUC-Sha-107602	Sarcophilus harrisii	32.24	7.00e-40	158.00
IUUC-Sja-107993	Schizosaccharomyces japonicus	46.55	5.00e-13	68.90
IUUC-Spo-108304	Schizosaccharomyces pombe	29.70	5.00e-16	78.60
IUUC-Ssl-108546	Sclerotinia sclerotiorum	39.66	3.00e-09	56.20
IUUC-Smo-109550	Selaginella moellendorffii	41.69	2.00e-164	572.00
IUUC-Sit-109889	Setaria italica	47.05	0.00e+00	744.00
IUUC-Sly-111490	Solanum lycopersicum	63.74	0.00e+00	988.00
IUUC-Sar-113349	Sorex araneus	32.62	9.00e-20	91.70
IUUC-Sbi-114734	Sorghum bicolor	48.48	3.00e-64	237.00
IUUC-Sre-115087	Sporisorium reilianum	42.86	3.00e-15	76.60
IUUC-Ssc-116134	Sus scrofa	32.80	2.00e-38	154.00
IUUC-Tgu-116549	Taeniopygia guttata	40.20	3.00e-19	90.10
IUUC-Tru-117867	Takifugu rubripes	31.03	2.00e-37	150.00
IUUC-Tsy-118808	Tarsius syrichta	38.24	5.00e-19	89.00
IUUC-Tni-120802	Tetraodon nigroviridis	31.69	2.00e-37	150.00
IUUC-Tca-121060	Theobroma cacao	70.91	0.00e+00	1209.00
IUUC-Tre-122150	Trichoderma reesei	43.10	8.00e-11	61.60
IUUC-Tvi-122431	Trichoderma virens	41.38	4.00e-10	59.30
IUUC-Tae-125456	Triticum aestivum	47.86	0.00e+00	711.00
IUUC-Tur-126786	Triticum urartu	43.20	0.00e+00	630.00
IUUC-Tme-127177	Tuber melanosporum	32.46	7.00e-11	61.60
IUUC-Tbe-127597	Tupaia belangeri	33.55	4.00e-35	142.00
IUUC-Ttr-128303	Tursiops truncatus	32.36	2.00e-37	150.00
IUUC-Uma-129488	Ustilago maydis	42.86	5.00e-15	75.90
IUUC-Vda-129815	Verticillium dahliae	40.38	5.00e-09	55.80
IUUC-Vpa-130237	Vicugna pacos	38.24	1.00e-18	88.20
IUUC-Xtr-132906	Xenopus tropicalis	27.55	3.00e-35	143.00
IUUC-Xma-133365	Xiphophorus maculatus	31.20	3.00e-28	120.00
IUUC-Yli-134445	Yarrowia lipolytica	38.10	2.00e-11	63.50
IUUC-Zma-135805	Zea mays	45.59	0.00e+00	694.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence