iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112382

Ensembl Protein ID

PGSC0003DMT400049874

UniProt Accession

M1BPG6; M1BPG6_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400019379	PGSC0003DMT400049873	PGSC0003DMT400049873
PGSC0003DMG400019379	PGSC0003DMT400049874	PGSC0003DMT400049874

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-27	95.3	878	909

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlr 31
           gH+  v+ ++f d ++lvs+s D+t+k+WDl+
   Q: 878  GHEKAVSYVKFLDyGTLVSASTDNTLKLWDLK 909
           89999******66699**************96 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDKSKEEAEA NDVGANVLSR TRECDSGEPS MRKCTSTSHE LPEGSTSASS GMLETDGMNR 60
NVTSMKGPQL HGTSSYSRLT VEKLCNYKIS EPASLRCSNN QETNQKPQIQ WQRFYQLGSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTGGCGAA AACAATTTTT TTTTTCCAAG TGGGATGACT GACTGATTCA TCAATCATCA 60
TATCCATAGA GTAAATTAAT GCACAAATAA TTGCACAGTA GCAAATTTCT AGTTGTGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0009658--P:chloroplast organization
GO:0010100--P:negative regulation of photomorphogenesis
GO:0009640--P:photomorphogenesis
GO:0010017--P:red or far-red light signaling pathway
GO:2000028--P:regulation of photoperiodism, flowering
GO:0009637--P:response to blue light
GO:0010218--P:response to far red light
GO:0010114--P:response to red light
GO:0048575--P:short-day photoperiodism, flowering

KEGG

sot:102593062

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	45.62	0.00e+00	739.00
IUUC-Atr-002506	Amborella trichopoda	46.71	0.00e+00	683.00
IUUC-Aly-005520	Arabidopsis lyrata	46.34	0.00e+00	795.00
IUUC-Ath-007297	Arabidopsis thaliana	46.35	0.00e+00	774.00
IUUC-Bdi-014698	Brachypodium distachyon	48.38	0.00e+00	732.00
IUUC-Bol-015237	Brassica oleracea	46.96	0.00e+00	761.00
IUUC-Bra-016642	Brassica rapa	46.03	0.00e+00	740.00
IUUC-Gma-044005	Glycine max	54.16	0.00e+00	770.00
IUUC-Hvu-047750	Hordeum vulgare	49.94	0.00e+00	748.00
IUUC-Lpe-051349	Leersia perrieri	49.62	0.00e+00	744.00
IUUC-Mtr-058593	Medicago truncatula	47.08	0.00e+00	784.00
IUUC-Mac-065358	Musa acuminata	49.32	0.00e+00	728.00
IUUC-Oba-075097	Oryza barthii	39.30	6.00e-168	583.00
IUUC-Obr-076441	Oryza brachyantha	44.37	0.00e+00	727.00
IUUC-Ogl-077669	Oryza glaberrima	44.68	0.00e+00	735.00
IUUC-Ogu-078009	Oryza glumaepatula	39.69	9.00e-169	586.00
IUUC-Oin-079775	Oryza indica	44.68	0.00e+00	735.00
IUUC-Olo-080230	Oryza longistaminata	41.91	6.00e-164	570.00
IUUC-Ome-081669	Oryza meridionalis	39.36	2.00e-166	578.00
IUUC-Oni-082065	Oryza nivara	39.41	2.00e-168	585.00
IUUC-Opu-083153	Oryza punctata	40.72	1.00e-168	585.00
IUUC-Oru-084928	Oryza rufipogon	39.30	7.00e-168	583.00
IUUC-Osa-085875	Oryza sativa	44.57	0.00e+00	733.00
IUUC-Pop-099610	Populus trichocarpa	46.25	0.00e+00	788.00
IUUC-Ppe-101782	Prunus persica	48.95	0.00e+00	840.00
IUUC-Sit-110269	Setaria italica	48.74	0.00e+00	744.00
IUUC-Sly-111623	Solanum lycopersicum	95.00	0.00e+00	1965.00
IUUC-Sbi-114133	Sorghum bicolor	48.74	0.00e+00	734.00
IUUC-Tca-121762	Theobroma cacao	49.53	0.00e+00	828.00
IUUC-Tae-123049	Triticum aestivum	48.76	0.00e+00	757.00
IUUC-Tur-126357	Triticum urartu	46.40	0.00e+00	694.00
IUUC-Vvi-131450	Vitis vinifera	50.57	0.00e+00	920.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence