iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-18	65.1	167	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           +H+d++t ++f  s+ +++vsGs Dg + v+Dl+ 
   Q: 167  THSDDITQVRFhpSNpNMVVSGSTDGLVNVFDLSV 201
           5***********9778****************965 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEKIKDQFAN LHILRRSSEP KEPTYLLGID TSKTVPAEKG GLVAVLCSNG SIRIYDKETL 60
NLLREFSGSP GLLNGVRFAN SCDNVYSAST DGTVKCWDAR LASEKPAQLF KGYPSNIFIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTCACAGG TGCTCTCCAC AGCCGGGCCG GAAGCTTTGC GATAACTGCC ACAGGGCAAC 60
CTTTCTCCAA AGTTTCCCGT GCTTATGTGT AAGAAGAGTA AACCCTGAGG TCAGACTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

rno:314243

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000596	Aegilops tauschii	31.64	1.00e-34	140.00
IUUC-Aml-001254	Ailuropoda melanoleuca	83.72	0.00e+00	684.00
IUUC-Atr-003047	Amborella trichopoda	26.90	5.00e-20	92.00
IUUC-Apl-003479	Anas platyrhynchos	65.12	1.00e-152	532.00
IUUC-Aca-004537	Anolis carolinensis	61.66	3.00e-138	484.00
IUUC-Aly-006050	Arabidopsis lyrata	27.30	5.00e-24	105.00
IUUC-Ath-007363	Arabidopsis thaliana	27.54	1.00e-23	103.00
IUUC-Ago-007711	Ashbya gossypii	27.71	5.00e-20	92.00
IUUC-Acl-008076	Aspergillus clavatus	26.14	4.00e-20	92.40
IUUC-Afl-008448	Aspergillus flavus	35.33	1.00e-18	88.20
IUUC-Ani-009327	Aspergillus nidulans	27.17	6.00e-24	104.00
IUUC-Ang-009652	Aspergillus niger	28.75	7.00e-23	101.00
IUUC-Aor-009897	Aspergillus oryzae	34.67	1.00e-18	86.70
IUUC-Ame-011078	Astyanax mexicanus	46.41	2.00e-90	325.00
IUUC-Bgr-012252	Blumeria graminis	30.58	1.00e-30	127.00
IUUC-Bta-012703	Bos taurus	81.65	0.00e+00	639.00
IUUC-Bci-013979	Botrytis cinerea	30.59	2.00e-24	106.00
IUUC-Bdi-014266	Brachypodium distachyon	29.21	1.00e-28	120.00
IUUC-Bol-015632	Brassica oleracea	31.07	1.00e-15	75.90
IUUC-Bra-016730	Brassica rapa	27.48	2.00e-24	107.00
IUUC-Cja-019235	Callithrix jacchus	81.91	0.00e+00	655.00
IUUC-Cfa-020750	Canis familiaris	82.95	0.00e+00	669.00
IUUC-Cpo-021566	Cavia porcellus	74.42	8.00e-170	589.00
IUUC-Csa-023742	Chlorocebus sabaeus	82.17	0.00e+00	661.00
IUUC-Cho-024447	Choloepus hoffmanni	73.51	5.00e-165	573.00
IUUC-Cgl-026483	Colletotrichum gloeosporioides	31.52	9.00e-26	110.00
IUUC-Cne-026996	Cryptococcus neoformans	25.87	9.00e-14	71.60
IUUC-Dre-028760	Danio rerio	44.39	4.00e-93	334.00
IUUC-Dno-028909	Dasypus novemcinctus	81.61	0.00e+00	640.00
IUUC-Dor-030224	Dipodomys ordii	84.77	5.00e-133	466.00
IUUC-Dse-031410	Dothistroma septosporum	29.58	4.00e-23	102.00
IUUC-Dme-031947	Drosophila melanogaster	30.54	4.00e-32	132.00
IUUC-Eca-034117	Equus caballus	84.24	0.00e+00	687.00
IUUC-Eeu-035227	Erinaceus europaeus	78.81	0.00e+00	647.00
IUUC-Fca-036221	Felis catus	82.17	0.00e+00	663.00
IUUC-Fal-037285	Ficedula albicollis	58.46	3.00e-127	448.00
IUUC-Fox-037865	Fusarium oxysporum	29.39	2.00e-23	103.00
IUUC-Fso-038466	Fusarium solani	30.62	9.00e-28	117.00
IUUC-Ggr-040120	Gaeumannomyces graminis	30.94	4.00e-35	141.00
IUUC-Gga-041255	Gallus gallus	63.57	2.00e-149	521.00
IUUC-Gma-044345	Glycine max	26.74	4.00e-28	118.00
IUUC-Ggo-045118	Gorilla gorilla	81.91	0.00e+00	670.00
IUUC-Hsa-046961	Homo sapiens	81.65	0.00e+00	667.00
IUUC-Hvu-047219	Hordeum vulgare	31.91	4.00e-36	145.00
IUUC-Itr-048310	Ictidomys tridecemlineatus	83.20	0.00e+00	676.00
IUUC-Kpa-049122	Komagataella pastoris	29.26	7.00e-23	101.00
IUUC-Lch-050390	Latimeria chalumnae	57.33	1.00e-121	429.00
IUUC-Loc-052076	Lepisosteus oculatus	48.63	6.00e-95	340.00
IUUC-Lma-053270	Leptosphaeria maculans	30.36	2.00e-18	86.30
IUUC-Laf-054241	Loxodonta africana	82.38	0.00e+00	679.00
IUUC-Mcc-055445	Macaca mulatta	81.40	0.00e+00	668.00
IUUC-Meu-056701	Macropus eugenii	71.76	3.00e-106	377.00
IUUC-Mor-056911	Magnaporthe oryzae	29.23	7.00e-28	117.00
IUUC-Mpo-057525	Magnaporthe poae	30.42	1.00e-33	137.00
IUUC-Mtr-058036	Medicago truncatula	27.30	9.00e-29	120.00
IUUC-Mla-058923	Melampsora laricipopulina	27.56	2.00e-18	86.70
IUUC-Mga-059779	Meleagris gallopavo	63.82	2.00e-150	525.00
IUUC-Mvi-060394	Microbotryum violaceum	26.47	5.00e-20	92.00
IUUC-Mmr-061573	Microcebus murinus	81.65	0.00e+00	654.00
IUUC-Mdo-062961	Monodelphis domestica	62.95	2.00e-155	541.00
IUUC-Mmu-063554	Mus musculus	91.71	0.00e+00	711.00
IUUC-Mac-064862	Musa acuminata	30.43	4.00e-29	122.00
IUUC-Mpu-066725	Mustela putorius furo	82.17	0.00e+00	661.00
IUUC-Mlu-067095	Myotis lucifugus	81.70	0.00e+00	664.00
IUUC-Nfi-068488	Neosartorya fischeri	28.35	3.00e-24	105.00
IUUC-Ncr-068709	Neurospora crassa	28.82	4.00e-27	115.00
IUUC-Nle-069614	Nomascus leucogenys	81.49	0.00e+00	668.00
IUUC-Opr-070604	Ochotona princeps	80.10	0.00e+00	661.00
IUUC-Ont-071684	Oreochromis niloticus	48.71	5.00e-102	364.00
IUUC-Oan-073074	Ornithorhynchus anatinus	65.30	3.00e-149	521.00
IUUC-Ocu-074393	Oryctolagus cuniculus	82.95	0.00e+00	637.00
IUUC-Oba-075342	Oryza barthii	29.60	1.00e-30	127.00
IUUC-Obr-076370	Oryza brachyantha	28.86	6.00e-30	124.00
IUUC-Ogl-077049	Oryza glaberrima	29.09	9.00e-31	127.00
IUUC-Ogu-078466	Oryza glumaepatula	29.49	1.00e-30	127.00
IUUC-Oin-080214	Oryza indica	29.97	5.00e-26	111.00
IUUC-Olo-080978	Oryza longistaminata	29.97	5.00e-26	111.00
IUUC-Ome-081321	Oryza meridionalis	29.67	1.00e-28	121.00
IUUC-Oni-082345	Oryza nivara	29.49	1.00e-30	127.00
IUUC-Opu-083337	Oryza punctata	29.80	2.00e-30	126.00
IUUC-Oru-085094	Oryza rufipogon	29.49	1.00e-30	127.00
IUUC-Osa-085382	Oryza sativa	28.28	7.00e-14	70.90
IUUC-Ola-087540	Oryzias latipes	41.49	2.00e-83	302.00
IUUC-Oga-088329	Otolemur garnettii	80.88	0.00e+00	652.00
IUUC-Oar-089413	Ovis aries	82.43	0.00e+00	640.00
IUUC-Ptr-090534	Pan troglodytes	81.91	0.00e+00	671.00
IUUC-Pan-092581	Papio anubis	81.35	0.00e+00	665.00
IUUC-Psi-093812	Pelodiscus sinensis	65.70	9.00e-153	533.00
IUUC-Pma-094758	Petromyzon marinus	38.50	5.00e-29	120.00
IUUC-Ppa-095216	Physcomitrella patens	27.55	3.00e-26	112.00
IUUC-Pab-098114	Pongo abelii	81.91	0.00e+00	669.00
IUUC-Pop-099394	Populus trichocarpa	28.27	4.00e-28	118.00
IUUC-Pca-100968	Procavia capensis	82.43	1.00e-178	618.00
IUUC-Ppe-101385	Prunus persica	26.15	1.00e-22	100.00
IUUC-Pva-102164	Pteropus vampyrus	84.20	0.00e+00	656.00
IUUC-Pgr-103524	Puccinia graminis	25.41	3.00e-15	76.30
IUUC-Ptt-103863	Puccinia triticina	25.32	3.00e-11	62.00
IUUC-Pyt-104666	Pyrenophora triticirepentis	25.40	8.00e-11	61.20
IUUC-Sce-106334	Saccharomyces cerevisiae	32.50	1.00e-21	97.10
IUUC-Sha-107540	Sarcophilus harrisii	70.28	2.00e-164	571.00
IUUC-Sja-107890	Schizosaccharomyces japonicus	27.75	4.00e-21	95.10
IUUC-Spo-108342	Schizosaccharomyces pombe	25.40	1.00e-15	77.40
IUUC-Ssl-108488	Sclerotinia sclerotiorum	28.72	2.00e-15	78.20
IUUC-Smo-108767	Selaginella moellendorffii	29.97	2.00e-26	112.00
IUUC-Sit-110267	Setaria italica	28.86	5.00e-32	132.00
IUUC-Sly-111439	Solanum lycopersicum	28.53	5.00e-31	128.00
IUUC-Stu-112664	Solanum tuberosum	27.42	9.00e-30	124.00
IUUC-Sar-113388	Sorex araneus	78.81	0.00e+00	644.00
IUUC-Sbi-114679	Sorghum bicolor	30.56	6.00e-30	125.00
IUUC-Sre-115113	Sporisorium reilianum	27.97	1.00e-21	97.80
IUUC-Ssc-115311	Sus scrofa	81.91	0.00e+00	648.00
IUUC-Tgu-116672	Taeniopygia guttata	60.36	3.00e-134	471.00
IUUC-Tru-117689	Takifugu rubripes	45.62	1.00e-91	329.00
IUUC-Tsy-119627	Tarsius syrichta	81.91	0.00e+00	658.00
IUUC-Tni-120137	Tetraodon nigroviridis	44.96	2.00e-91	329.00
IUUC-Tca-120958	Theobroma cacao	26.92	2.00e-25	110.00
IUUC-Tre-122133	Trichoderma reesei	29.89	1.00e-23	103.00
IUUC-Tvi-122387	Trichoderma virens	30.60	2.00e-25	109.00
IUUC-Tae-125823	Triticum aestivum	31.55	1.00e-34	140.00
IUUC-Ttr-128539	Tursiops truncatus	83.98	0.00e+00	679.00
IUUC-Uma-129403	Ustilago maydis	26.35	1.00e-19	91.30
IUUC-Vda-129978	Verticillium dahliae	23.32	4.00e-14	72.00
IUUC-Vpa-130315	Vicugna pacos	82.64	0.00e+00	653.00
IUUC-Vvi-131262	Vitis vinifera	29.01	3.00e-29	122.00
IUUC-Xtr-132190	Xenopus tropicalis	54.81	4.00e-123	434.00
IUUC-Yli-134492	Yarrowia lipolytica	29.58	2.00e-22	100.00
IUUC-Zma-135832	Zea mays	29.91	7.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence