iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131168

UUCD1 version

UUC-ViV-00145

Ensembl Protein ID

VIT_00s0524g00030.t01

UniProt Accession

D7SZ16; D7SZ16_VITVI

Genbank Protein ID

CBI23501.3

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595285

Gene Name

VIT_00s0524g00030

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0524g00030	VIT_00s0524g00030.t01	VIT_00s0524g00030.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-33	114.2	67	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            peef+Cp+s e+MrdPv+l++G+tydr  I+kwl+ g++tcP+t+q l++++l+Pn+ +r++i++wc+++++
   Q: 67   FPEEFRCPLSREMMRDPVILATGQTYDRPFIQKWLKAGNRTCPLTQQVLSHTMLTPNHLIREMISQWCQSHGI 139
           69********************************************************************987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAKTGVLETD PRVAELKKEL QRLVKSIVED DDYSVEVMDR AREALCSIKD LKVKRSMSLK 60
LHGPHSFPEE FRCPLSREMM RDPVILATGQ TYDRPFIQKW LKAGNRTCPL TQQVLSHTML 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAATTTTG CCATCAATGC CACGGTGAGG AAATGATGAG CCATAGAACT CCAGGAAAAC 60
GATATCATAG CAGAGATTTC GCAATCTAGG CATTTTATTA TGGCGAAAAC GGGGGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100264137

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	61.77	6.00e-161	559.00
IUUC-Ath-007457	Arabidopsis thaliana	61.34	3.00e-156	544.00
IUUC-Bol-015599	Brassica oleracea	61.79	5.00e-152	529.00
IUUC-Bra-017759	Brassica rapa	60.39	8.00e-147	512.00
IUUC-Gma-043804	Glycine max	68.98	5.00e-177	612.00
IUUC-Hvu-047411	Hordeum vulgare	48.21	3.00e-86	311.00
IUUC-Mtr-057877	Medicago truncatula	65.00	1.00e-171	595.00
IUUC-Pop-099806	Populus trichocarpa	74.34	0.00e+00	693.00
IUUC-Ppe-101662	Prunus persica	70.18	0.00e+00	652.00
IUUC-Sly-110911	Solanum lycopersicum	68.58	0.00e+00	650.00
IUUC-Stu-112732	Solanum tuberosum	67.99	0.00e+00	643.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence