iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108780

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377583

Gene Name

SELMODRAFT_2133

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_2133	EFJ26997	EFJ26997

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.80e-80	269.1	1	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflaflld 101
           G+kNlgNtCY+NSvLQcL+ +p+l++++l+ +++++++  n   +  ++++  +++ +++ + +  + +p++++k l+++a++f+  +q+Da+E+l++ +d
   Q: 1    GFKNLGNTCYLNSVLQCLTYTPPLANYCLRgQHSKQCDGAN---SACPFCMLENRISRSF-DIEVPVDAPQRIYKYLQTFAKHFRAGRQEDAHELLRYAID 97
           99****************************88888888765...4555555555555555.999************************************* PP
   S: 102  qleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeeleg 202
           + ++++ +                    +++  k++ +++++++F+g l+sqi cl+c+ vss+ ++ +dlsl++ + +     +l++++ +f+++e l+g
   Q: 98   ACDSACAR-------------------LQKRGSKSSDQTVMKEIFGGFLQSQIWCLSCNAVSSKLDSVMDLSLDIVRTK-----TLKEAICNFFQPEVLDG 174
           ******33...................34567889999*****************************************.....9**************** PP
   S: 203  enkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvkne 302
           +nky+cekckk++ a+k+l++ + P+vL+++LkRf    e+    ki+++vef +eL+l++++++++ ++  +  Y+L+avvvHsG s  +GHY+ayvk+ 
   Q: 175  NNKYQCEKCKKLSVARKQLSIYQSPNVLVIQLKRF----ENFLGGKIDTHVEFEEELKLRSHMSKNSPDV--HPDYSLYAVVVHSGfSQYGGHYYAYVKDP 269
           ***********************************....679999********************88777..9**************************** PP
   S: 303  kgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +g+W++++Ds V++ + ++vl+   +  Y+lfY r
   Q: 270  RGQWYCCNDSFVSAASSATVLS---ERVYILFYVR 301
           **********************...********87 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

GFKNLGNTCY LNSVLQCLTY TPPLANYCLR GQHSKQCDGA NSACPFCMLE NRISRSFDIE 60
VPVDAPQRIY KYLQTFAKHF RAGRQEDAHE LLRYAIDACD SACARLQKRG SKSSDQTVMK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTTTAAGA ATCTCGGCAA CACTTGCTAC TTGAACAGCG TACTTCAGTG CCTGACTTAC 60
ACTCCGCCGC TCGCGAACTA TTGCCTCCGG GGCCAACATT CCAAGCAATG TGAGTTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_2133

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002832	Amborella trichopoda	57.19	7.00e-109	387.00
IUUC-Aly-005983	Arabidopsis lyrata	57.42	4.00e-106	378.00
IUUC-Ath-006707	Arabidopsis thaliana	57.10	3.00e-105	375.00
IUUC-Bdi-014044	Brachypodium distachyon	52.50	6.00e-85	307.00
IUUC-Bol-016356	Brassica oleracea	54.60	9.00e-101	360.00
IUUC-Cme-027339	Cyanidioschyzon merolae	35.38	3.00e-51	195.00
IUUC-Gma-043410	Glycine max	58.20	1.00e-104	373.00
IUUC-Mtr-058396	Medicago truncatula	57.52	2.00e-104	372.00
IUUC-Mac-065596	Musa acuminata	55.63	2.00e-94	339.00
IUUC-Obr-076589	Oryza brachyantha	51.47	7.00e-78	284.00
IUUC-Oin-079451	Oryza indica	52.52	6.00e-93	334.00
IUUC-Oru-084652	Oryza rufipogon	47.06	9.00e-67	247.00
IUUC-Osa-085846	Oryza sativa	52.52	6.00e-93	334.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence