iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017079

Ensembl Protein ID

Bra023771.1-P

UniProt Accession

M4E4R7; M4E4R7_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023771	Bra023771.1	Bra023771.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.90e-17	64.2	77	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           vkvs++g+++++++dl+ + ++ +Llka++  ++          ++k+s v ++YeD+dGD++ l++D+++d++ s      s++rl+i+k
   Q: 77   VKVSMDGAPYLRKIDLKTYKNYPELLKALENlFKftigeynereGYKGSGVVPTYEDKDGDWM-LVGDVPWDMFSS------SCKRLRIMK 160
           9******************************8335599999999*******************.************......********8 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAYEKVNELN LKDTELRLGL PGTEQDKEEQ EVSCVRSNKR QLQSDNEEES TLPTKTQIVG 60
WPPVRSYRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE LLKALENLFK FTIGEYNERE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTACG AGAAAGTCAA TGAGCTTAAC CTTAAGGACA CAGAGCTTCG TCTTGGATTA 60
CCCGGAACGG AGCAAGATAA GGAAGAACAA GAGGTTTCTT GCGTTAGAAG CAACAAGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005851	Arabidopsis lyrata	88.51	9.00e-73	265.00
IUUC-Ath-007087	Arabidopsis thaliana	86.78	2.00e-72	265.00
IUUC-Bol-016210	Brassica oleracea	97.66	2.00e-96	343.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence