iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095217

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544912

Gene Name

PHYPADRAFT_24038

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S23_89V6	PP1S23_89V6.1	PP1S23_89V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-09	38.2	182	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+df   +++++lpC H+fh  C+ +w       + + +CP Cr
   Q: 182  CPICLDDFdvGNEVRTLPCTHTFHVACIDAW------LRLNVKCPHCR 223
           ********88566******************......**********8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MTWKHLASRI VVLVNWQRYL LCRRPLHIWI VVDYATVFLF RILMFIDSGL ASGMGPEATQ 60
MERMLRFKGR LFVLSVLSFV FYPFLWMWTI LGSLWFSDTQ GCLPEEGQKW GFLIWLVFSY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTTGGA AACATTTGGC AGCTCACAAC TGTTCATACA TCAATATGTG TAGTCTTTAA 60
CTTGAGTAGA GCAGGATTGT TGTACTCGTG AATTGGCAGC GATATCTGTT GTGTAGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_24038

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	51.87	2.00e-74	273.00
IUUC-Atr-002648	Amborella trichopoda	51.50	2.00e-71	261.00
IUUC-Aly-006490	Arabidopsis lyrata	46.96	4.00e-70	257.00
IUUC-Ath-007655	Arabidopsis thaliana	46.50	1.00e-69	255.00
IUUC-Bdi-014759	Brachypodium distachyon	52.24	3.00e-69	254.00
IUUC-Bol-015136	Brassica oleracea	44.73	6.00e-70	256.00
IUUC-Bra-018024	Brassica rapa	45.28	6.00e-68	250.00
IUUC-Gma-043526	Glycine max	59.21	5.00e-78	283.00
IUUC-Hvu-047589	Hordeum vulgare	64.29	1.00e-44	171.00
IUUC-Lpe-051403	Leersia perrieri	39.78	1.00e-42	166.00
IUUC-Mtr-058746	Medicago truncatula	50.00	2.00e-77	281.00
IUUC-Mac-064833	Musa acuminata	49.00	5.00e-74	270.00
IUUC-Oba-075099	Oryza barthii	51.58	4.00e-75	274.00
IUUC-Obr-076541	Oryza brachyantha	52.61	1.00e-75	275.00
IUUC-Ogl-077544	Oryza glaberrima	49.67	2.00e-75	275.00
IUUC-Ogu-078123	Oryza glumaepatula	53.02	8.00e-76	276.00
IUUC-Oin-079313	Oryza indica	49.67	1.00e-75	275.00
IUUC-Olo-080383	Oryza longistaminata	52.54	4.00e-27	114.00
IUUC-Ome-081106	Oryza meridionalis	43.37	3.00e-60	224.00
IUUC-Oni-082730	Oryza nivara	49.67	2.00e-75	275.00
IUUC-Opu-083224	Oryza punctata	51.58	2.00e-75	275.00
IUUC-Oru-085150	Oryza rufipogon	48.03	8.00e-65	240.00
IUUC-Osa-086306	Oryza sativa	49.67	1.00e-75	275.00
IUUC-Pop-099421	Populus trichocarpa	53.08	1.00e-71	262.00
IUUC-Ppe-101399	Prunus persica	46.45	9.00e-63	233.00
IUUC-Smo-109501	Selaginella moellendorffii	55.47	6.00e-81	293.00
IUUC-Sit-109685	Setaria italica	52.06	8.00e-74	270.00
IUUC-Sly-111388	Solanum lycopersicum	52.59	1.00e-77	282.00
IUUC-Stu-112821	Solanum tuberosum	52.59	8.00e-78	283.00
IUUC-Sbi-114646	Sorghum bicolor	52.81	3.00e-74	271.00
IUUC-Tca-121643	Theobroma cacao	48.00	1.00e-73	269.00
IUUC-Tae-123724	Triticum aestivum	49.16	7.00e-74	270.00
IUUC-Tur-126639	Triticum urartu	48.89	5.00e-55	208.00
IUUC-Vvi-131627	Vitis vinifera	43.53	8.00e-66	243.00
IUUC-Zma-135793	Zea mays	52.81	5.00e-73	267.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence