• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Details
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP
  • SNP
    • dbSNP
  • mRNA Expression
    • GEO
  • PPI
    • iRefIndex
    • PINA
    • HINT
    • Mentha
  • 3D Structure
    • PDB
    • MMDB
  • Proteomics

Tag Content
iUUCD ID IUUC-Osa-085991
UUCD1 version UUC-OrS-01054
Ensembl Protein ID OS06T0102700-01
UniProt Accession Q5VRH9; Q5VRH8; PUB12_ORYSJ
Genbank Protein ID BAD67946.1; BAD67947.1; BAF18449.2; BAS95707.1; BAG90500.1
Protein Name U-box domain-containing protein 12; Plant U-box protein 12; RING-type E3 ubiquitin transferase PUB12
Genbank Nucleotide ID AP002842; AP002842; AP008212; AP014962; AK067611; AK071080
Gene Name PUB12; Os06g0102700; LOC_Os06g01304; OSJNBa0075G19.19-1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OS06G0102700 OS06T0102700-01 OS06T0102700-01
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/U-box U-box 19825583
Classification
Family E-value Score Start End
E3 activity/RING/U-box 1.60e-36 125.1 228 300
E3 activity/RING/RING 0.00055 21.3 234 270
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIslelM+dPv+++sG+ty+rs+I+kwl+sg+ktcP+t+qpl++++l+Pn +l++li++wce+n++
   Q: 228  IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGI 300
           79********************************************************************986 PP
   

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCP 43
           C+i le ++d p++++ g ++ ++C+qkw     + s++ +CP
   Q: 234  CPISLELMQD-PVIVSSGQTYERSCIQKW-----LDSGHKTCP 270
           **********.999***************.....899999999 PP
   
Organism Oryza sativa
Functional Description
(View)

Functional Description


     Possesses E3 ubiquitin-protein ligase in vitro.
 Possesses E3 ubiquitin-protein ligase in vitro.
Protein Sequence
(Fasta)
MPKRVADEIA ALPEPRGPLR RPCADLSRRV RLLAPLLDHL PASSSSSSST PLADALGAAR 60
DLLRKTRDGS KIDQAMRGDA FLDEFAGVNR QIHLALDALP YNTFHMPQEV QEQVALVHSQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Osa-085991|E3,U-box;E3,RING|Oryza sativa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCTTGGCTT GCTGTCCGCC CGCGTTCACA AGGAGAGGAG AGGAGGTTGA GGTTGATCTT 60
GAGTGTGAGG AGAGGCGAGA TCGGAAAAAG GGGAAATCGG CGTTGCGATG CCGAAGCGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Osa-085991|E3,U-box;E3,RING|Oryza sativa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX
Pfam

PF00514--Arm
PF04564--U-box
SMART

SM00185--ARM
SM00504--Ubox
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0016567--P:protein ubiquitination
KEGG osa:4339839
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002932 Amborella trichopoda 58.64 0.00e+00 684.00
IUUC-Aly-006103 Arabidopsis lyrata 58.46 0.00e+00 638.00
IUUC-Ath-006994 Arabidopsis thaliana 57.95 0.00e+00 637.00
IUUC-Bdi-014691 Brachypodium distachyon 86.96 0.00e+00 951.00
IUUC-Bol-016160 Brassica oleracea 56.79 0.00e+00 637.00
IUUC-Bra-016727 Brassica rapa 56.62 0.00e+00 635.00
IUUC-Cel-018336 Caenorhabditis elegans 31.11 4.00e-09 56.60
IUUC-Gma-043634 Glycine max 59.30 0.00e+00 711.00
IUUC-Hvu-047272 Hordeum vulgare 83.24 0.00e+00 898.00
IUUC-Itr-048039 Ictidomys tridecemlineatus 30.98 3.00e-09 57.00
IUUC-Lpe-051517 Leersia perrieri 93.21 0.00e+00 1033.00
IUUC-Mtr-057651 Medicago truncatula 59.31 0.00e+00 669.00
IUUC-Mac-064891 Musa acuminata 55.17 3.00e-175 607.00
IUUC-Oba-075750 Oryza barthii 99.50 0.00e+00 1149.00
IUUC-Obr-076793 Oryza brachyantha 94.71 0.00e+00 999.00
IUUC-Ogl-077380 Oryza glaberrima 99.67 0.00e+00 1150.00
IUUC-Ogu-078219 Oryza glumaepatula 98.51 0.00e+00 1142.00
IUUC-Oin-079724 Oryza indica 99.17 0.00e+00 1182.00
IUUC-Olo-080320 Oryza longistaminata 86.09 0.00e+00 984.00
IUUC-Ome-081932 Oryza meridionalis 98.51 0.00e+00 1142.00
IUUC-Oni-082439 Oryza nivara 99.50 0.00e+00 1148.00
IUUC-Opu-083837 Oryza punctata 97.68 0.00e+00 1166.00
IUUC-Oru-085172 Oryza rufipogon 99.50 0.00e+00 1152.00
IUUC-Pop-099229 Populus trichocarpa 59.30 0.00e+00 693.00
IUUC-Ppe-101965 Prunus persica 55.22 0.00e+00 650.00
IUUC-Sit-110461 Setaria italica 86.99 0.00e+00 874.00
IUUC-Sly-111662 Solanum lycopersicum 59.93 0.00e+00 693.00
IUUC-Stu-111979 Solanum tuberosum 60.43 0.00e+00 696.00
IUUC-Sbi-114550 Sorghum bicolor 82.12 0.00e+00 969.00
IUUC-Ssc-116061 Sus scrofa 31.52 9.00e-12 65.50
IUUC-Tca-121269 Theobroma cacao 59.97 0.00e+00 691.00
IUUC-Tae-124061 Triticum aestivum 82.21 0.00e+00 939.00
IUUC-Tur-126276 Triticum urartu 81.77 0.00e+00 870.00
IUUC-Tbe-127613 Tupaia belangeri 32.64 6.00e-09 55.80
IUUC-Ttr-128612 Tursiops truncatus 26.98 8.00e-12 65.90
IUUC-Vvi-131729 Vitis vinifera 62.19 0.00e+00 709.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved