iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109389

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377565

Gene Name

SELMODRAFT_270206

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_270206	EFJ38656	EFJ38656

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-09	37.1	211	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle  ++g  +++lpC H+fh +C+ +w       +++++CP+C+
   Q: 211  CSVCLEQVMEGeiVRTLPCLHQFHPHCIDQW------LRQQATCPVCK 252
           ********88888******************......**********7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSFVFRGTRA DIESGFHDFI PERRAVRFHG GGRPLNTNPV IIFITMFLLF MVLNSQPVSP 60
NFLLWFGMAV FLITTSIRMY AMCQQIQAHA NAAAVAATAN GLIGHTELRL RMPPIAFATR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTTTTAGG TTTTTTAGGT CTCCATTTTC TTCCCAGCTG CGAGGATGAG CTTCGTCTTC 60
CGGGGGACGA GAGCCGACAT CGAGAGCGGG TTCCACGATT TCATACCCGA GCGGCGAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_270206

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	45.00	9.00e-46	176.00
IUUC-Atr-002651	Amborella trichopoda	57.85	2.00e-61	228.00
IUUC-Aly-006305	Arabidopsis lyrata	62.65	2.00e-68	251.00
IUUC-Ath-007026	Arabidopsis thaliana	62.40	3.00e-66	244.00
IUUC-Cin-025569	Ciona intestinalis	47.92	4.00e-12	65.90
IUUC-Csv-025869	Ciona savignyi	46.67	6.00e-12	65.10
IUUC-Fox-038011	Fusarium oxysporum	48.33	5.00e-14	71.60
IUUC-Hvu-047764	Hordeum vulgare	56.72	7.00e-52	196.00
IUUC-Lpe-051371	Leersia perrieri	59.04	2.00e-51	194.00
IUUC-Mac-065081	Musa acuminata	60.07	2.00e-60	224.00
IUUC-Oba-075903	Oryza barthii	54.29	4.00e-19	86.70
IUUC-Obr-076184	Oryza brachyantha	52.29	1.00e-45	176.00
IUUC-Ogl-076965	Oryza glaberrima	59.04	4.00e-53	200.00
IUUC-Ogu-078414	Oryza glumaepatula	51.29	3.00e-40	157.00
IUUC-Oin-079430	Oryza indica	59.04	5.00e-53	200.00
IUUC-Olo-080739	Oryza longistaminata	58.67	1.00e-52	199.00
IUUC-Ome-081538	Oryza meridionalis	59.04	4.00e-53	201.00
IUUC-Oni-082633	Oryza nivara	59.04	4.00e-53	201.00
IUUC-Opu-084125	Oryza punctata	58.76	3.00e-53	200.00
IUUC-Oru-085061	Oryza rufipogon	51.29	3.00e-40	157.00
IUUC-Osa-086209	Oryza sativa	59.04	5.00e-53	200.00
IUUC-Ppa-095613	Physcomitrella patens	59.19	5.00e-60	223.00
IUUC-Pop-099435	Populus trichocarpa	61.78	8.00e-69	252.00
IUUC-Sbi-113958	Sorghum bicolor	56.67	8.00e-58	216.00
IUUC-Tae-125370	Triticum aestivum	55.60	4.00e-51	194.00
IUUC-Tur-125977	Triticum urartu	50.19	6.00e-50	190.00
IUUC-Vvi-131326	Vitis vinifera	61.30	2.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence