iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+ed+   ++ ++ lpC+H+fh +C+  w        ++++CP+Cr
   Q: 231  CPVCKEDYalgER-VRQLPCNHLFHDSCIVPW------LEQHDSCPVCR 272
           ********99777.******************......**********8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAEASPQPGR YFCHCCSVEI VPRLPDYICP RCESGFIEEL PEETRNTENG SAPSTAPTDQ 60
NRQPFENVDQ HLFTLPQGYS QFAFGIFDDS FEIPAFPPGA QADDGRDPES RREREHQSRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGCGGGC GGCGCGGAGG CGGCGGTGGC CATGGCTGAG GCGTCGCCGC AGCCCGGACG 60
GTACTTCTGC CACTGCTGTT CGGTGGAGAT CGTGCCGCGC CTGCCGGTGA GACCCGGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0042059--P:negative regulation of epidermal growth factor receptor signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070936--P:protein K48-linked ubiquitination
GO:0070534--P:protein K63-linked ubiquitination
GO:0006513--P:protein monoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0042127--P:regulation of cell proliferation
GO:0042147--P:retrograde transport, endosome to Golgi
GO:0071629--P:ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome
GO:0043162--P:ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000551	Aegilops tauschii	45.79	1.00e-24	106.00
IUUC-Aml-002001	Ailuropoda melanoleuca	92.97	9.00e-147	512.00
IUUC-Atr-002522	Amborella trichopoda	49.47	7.00e-27	113.00
IUUC-Apl-003778	Anas platyrhynchos	80.00	2.00e-100	358.00
IUUC-Aca-005166	Anolis carolinensis	78.88	2.00e-110	391.00
IUUC-Aly-006495	Arabidopsis lyrata	28.31	2.00e-21	96.30
IUUC-Ath-007616	Arabidopsis thaliana	31.60	4.00e-29	122.00
IUUC-Acl-008247	Aspergillus clavatus	41.96	1.00e-18	87.80
IUUC-Afl-008423	Aspergillus flavus	42.42	1.00e-17	84.30
IUUC-Afu-008920	Aspergillus fumigatus	44.44	1.00e-17	84.00
IUUC-Ani-009396	Aspergillus nidulans	40.82	2.00e-16	80.10
IUUC-Ang-009638	Aspergillus niger	45.19	2.00e-17	83.20
IUUC-Aor-009896	Aspergillus oryzae	42.00	1.00e-17	84.30
IUUC-Ame-010626	Astyanax mexicanus	72.76	2.00e-117	415.00
IUUC-Bta-012808	Bos taurus	92.10	6.00e-137	479.00
IUUC-Bdi-014137	Brachypodium distachyon	31.00	3.00e-26	112.00
IUUC-Cel-018216	Caenorhabditis elegans	40.79	3.00e-14	72.40
IUUC-Cja-019575	Callithrix jacchus	88.57	9.00e-134	469.00
IUUC-Cfa-020142	Canis familiaris	92.88	6.00e-130	456.00
IUUC-Cpo-022451	Cavia porcellus	92.23	9.00e-140	489.00
IUUC-Csa-023433	Chlorocebus sabaeus	92.63	7.00e-162	562.00
IUUC-Cgl-026759	Colletotrichum gloeosporioides	36.36	2.00e-16	80.90
IUUC-Cne-026837	Cryptococcus neoformans	39.76	2.00e-15	77.40
IUUC-Cme-027122	Cyanidioschyzon merolae	56.00	4.00e-14	73.60
IUUC-Dre-027400	Danio rerio	73.89	3.00e-119	421.00
IUUC-Dno-029349	Dasypus novemcinctus	91.16	6.00e-108	383.00
IUUC-Dor-030103	Dipodomys ordii	94.06	2.00e-122	431.00
IUUC-Eca-034240	Equus caballus	91.19	6.00e-104	369.00
IUUC-Fal-037027	Ficedula albicollis	81.85	9.00e-107	379.00
IUUC-Fox-037736	Fusarium oxysporum	37.08	1.00e-13	70.90
IUUC-Fso-038447	Fusarium solani	36.46	2.00e-15	77.40
IUUC-Gmo-039694	Gadus morhua	72.58	1.00e-126	446.00
IUUC-Ggr-039947	Gaeumannomyces graminis	33.33	1.00e-11	65.10
IUUC-Gga-040682	Gallus gallus	84.59	6.00e-129	453.00
IUUC-Gac-041364	Gasterosteus aculeatus	69.42	4.00e-114	404.00
IUUC-Gma-044015	Glycine max	33.94	6.00e-31	128.00
IUUC-Ggo-045421	Gorilla gorilla	91.11	2.00e-134	471.00
IUUC-Hsa-046723	Homo sapiens	93.79	1.00e-151	528.00
IUUC-Hvu-047602	Hordeum vulgare	29.58	2.00e-24	106.00
IUUC-Itr-048435	Ictidomys tridecemlineatus	94.76	2.00e-127	448.00
IUUC-Lch-050071	Latimeria chalumnae	82.75	3.00e-130	457.00
IUUC-Lpe-051427	Leersia perrieri	48.18	2.00e-26	112.00
IUUC-Loc-052470	Lepisosteus oculatus	64.54	3.00e-95	341.00
IUUC-Lma-053066	Leptosphaeria maculans	43.00	9.00e-21	95.10
IUUC-Laf-054249	Loxodonta africana	69.62	4.00e-69	254.00
IUUC-Mcc-055739	Macaca mulatta	93.61	4.00e-154	536.00
IUUC-Mor-057098	Magnaporthe oryzae	34.72	3.00e-12	67.00
IUUC-Mpo-057470	Magnaporthe poae	32.54	3.00e-12	67.00
IUUC-Mtr-057697	Medicago truncatula	26.20	1.00e-24	106.00
IUUC-Mga-059349	Meleagris gallopavo	80.48	6.00e-116	410.00
IUUC-Mvi-060434	Microbotryum violaceum	37.88	7.00e-20	91.70
IUUC-Mmr-060653	Microcebus murinus	94.25	1.00e-156	545.00
IUUC-Mdo-062442	Monodelphis domestica	89.04	2.00e-148	518.00
IUUC-Mmu-064148	Mus musculus	98.97	6.00e-153	533.00
IUUC-Mac-065133	Musa acuminata	30.26	3.00e-27	115.00
IUUC-Mpu-065917	Mustela putorius furo	89.74	1.00e-131	462.00
IUUC-Mlu-067495	Myotis lucifugus	93.49	1.00e-146	512.00
IUUC-Nfi-068352	Neosartorya fischeri	44.44	9.00e-18	84.70
IUUC-Nle-069274	Nomascus leucogenys	93.79	1.00e-142	498.00
IUUC-Opr-070359	Ochotona princeps	83.61	2.00e-91	328.00
IUUC-Ont-071505	Oreochromis niloticus	74.91	2.00e-121	428.00
IUUC-Oan-073225	Ornithorhynchus anatinus	82.26	1.00e-117	415.00
IUUC-Oba-075047	Oryza barthii	49.09	6.00e-27	114.00
IUUC-Obr-076829	Oryza brachyantha	50.91	1.00e-27	116.00
IUUC-Ogl-077378	Oryza glaberrima	49.09	7.00e-27	114.00
IUUC-Ogu-078709	Oryza glumaepatula	49.09	6.00e-27	114.00
IUUC-Oin-079400	Oryza indica	48.35	9.00e-23	100.00
IUUC-Olo-080762	Oryza longistaminata	49.09	6.00e-27	114.00
IUUC-Ome-081151	Oryza meridionalis	50.51	1.00e-23	103.00
IUUC-Oni-083090	Oryza nivara	49.09	6.00e-27	114.00
IUUC-Opu-083898	Oryza punctata	50.96	1.00e-26	113.00
IUUC-Oru-084267	Oryza rufipogon	49.09	6.00e-27	114.00
IUUC-Osa-086229	Oryza sativa	49.09	6.00e-27	114.00
IUUC-Ola-086315	Oryzias latipes	69.06	1.00e-116	412.00
IUUC-Oga-088067	Otolemur garnettii	94.14	1.00e-141	495.00
IUUC-Ptr-091404	Pan troglodytes	92.89	9.00e-112	395.00
IUUC-Pan-092424	Papio anubis	90.65	3.00e-152	530.00
IUUC-Psi-093171	Pelodiscus sinensis	84.76	4.00e-118	417.00
IUUC-Pma-094408	Petromyzon marinus	44.96	6.00e-63	234.00
IUUC-Ppa-095873	Physcomitrella patens	41.67	7.00e-25	108.00
IUUC-Pfo-097402	Poecilia formosa	69.62	4.00e-119	420.00
IUUC-Pab-097834	Pongo abelii	90.71	5.00e-108	383.00
IUUC-Pop-098993	Populus trichocarpa	31.62	9.00e-24	103.00
IUUC-Pca-100442	Procavia capensis	92.83	7.00e-102	363.00
IUUC-Ppe-101324	Prunus persica	48.62	2.00e-25	109.00
IUUC-Pva-103240	Pteropus vampyrus	92.33	4.00e-158	550.00
IUUC-Pgr-103273	Puccinia graminis	37.50	3.00e-17	82.80
IUUC-Ptt-103768	Puccinia triticina	39.22	3.00e-15	77.00
IUUC-Pte-104223	Pyrenophora teres	40.98	4.00e-21	96.70
IUUC-Pyt-104653	Pyrenophora triticirepentis	40.16	3.00e-21	96.30
IUUC-Sha-107638	Sarcophilus harrisii	87.27	1.00e-133	469.00
IUUC-Ssl-108600	Sclerotinia sclerotiorum	31.75	2.00e-12	67.40
IUUC-Smo-109651	Selaginella moellendorffii	51.69	2.00e-23	100.00
IUUC-Sit-110648	Setaria italica	52.25	6.00e-29	121.00
IUUC-Sly-111407	Solanum lycopersicum	28.81	1.00e-26	113.00
IUUC-Stu-112467	Solanum tuberosum	31.18	1.00e-26	113.00
IUUC-Sbi-114297	Sorghum bicolor	50.45	7.00e-28	117.00
IUUC-Tgu-117502	Taeniopygia guttata	83.56	5.00e-124	437.00
IUUC-Tru-117681	Takifugu rubripes	69.28	8.00e-116	409.00
IUUC-Tni-120092	Tetraodon nigroviridis	67.25	5.00e-112	397.00
IUUC-Tca-121480	Theobroma cacao	47.12	1.00e-25	110.00
IUUC-Tae-124679	Triticum aestivum	45.79	2.00e-24	106.00
IUUC-Tur-126792	Triticum urartu	54.46	3.00e-22	99.00
IUUC-Ttr-128843	Tursiops truncatus	93.10	9.00e-145	506.00
IUUC-Vda-129671	Verticillium dahliae	32.14	5.00e-15	76.30
IUUC-Vvi-131691	Vitis vinifera	31.32	4.00e-27	115.00
IUUC-Xtr-132815	Xenopus tropicalis	57.44	1.00e-95	342.00
IUUC-Xma-133481	Xiphophorus maculatus	69.30	1.00e-118	419.00
IUUC-Zma-135326	Zea mays	50.93	3.00e-26	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence