iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131195

UUCD1 version

UUC-ViV-00076

Ensembl Protein ID

VIT_08s0007g06660.t01

UniProt Accession

F6HLI0; F6HLI0_VITVI

Genbank Protein ID

CCB55236.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595991

Gene Name

VIT_08s0007g06660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g06660	VIT_08s0007g06660.t01	VIT_08s0007g06660.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	29.4	125	166
E3 activity/RING/U-box	3.50e-08	33.9	122	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  +d p+v+ CgH+f+  Cl++w    ++ s +  CP+C+
   Q: 125  CNICLDLARD-PVVTCCGHLFCWPCLYRW---LHVHSDAKECPVCK 166
           99****9999.999***************...556899999****7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPnl 59
           +f C I l+l rdPvv+++G+ +   ++ +wl   s+ k+cPv++ ++t ++++P +
   Q: 122  FFDCNICLDLARDPVVTCCGHLFCWPCLYRWLhvHSDAKECPVCKGEVTVKNVTPIY 178
           79******************************87777779**************987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNLDLNLGPG PEPGSGSNDP VSLNDWVQEP VHRIRESLRL RTRQRWRWRQ VQIPLEARNI 60
SMELMANTGN GSRPQEGEGS VAAEERDNEV PKMCENKTTH VEDEGLGGKD DIEKGSSGEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAAAACTC ATACCCGAAC CCACTCTTTC TCTCTCTAGA TTGTAGTCGA ATCCAATTTT 60
TCAGACAATC TTCTCTCTAG AACGGATCAC TGATCCAGAG AGAGCTCCAT CTATGGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000500	Aegilops tauschii	56.14	2.00e-36	145.00
IUUC-Atr-002855	Amborella trichopoda	65.69	3.00e-35	142.00
IUUC-Aly-006126	Arabidopsis lyrata	49.37	3.00e-85	308.00
IUUC-Ath-007143	Arabidopsis thaliana	49.50	1.00e-85	309.00
IUUC-Bdi-014503	Brachypodium distachyon	34.02	2.00e-36	146.00
IUUC-Bol-015635	Brassica oleracea	47.74	7.00e-82	296.00
IUUC-Bra-017049	Brassica rapa	47.74	6.00e-80	290.00
IUUC-Gma-042913	Glycine max	64.14	6.00e-128	449.00
IUUC-Hvu-047679	Hordeum vulgare	54.33	2.00e-37	148.00
IUUC-Lpe-051486	Leersia perrieri	47.44	7.00e-35	140.00
IUUC-Mtr-057874	Medicago truncatula	55.33	2.00e-112	398.00
IUUC-Mac-064953	Musa acuminata	50.00	4.00e-36	145.00
IUUC-Oba-075089	Oryza barthii	50.35	3.00e-36	145.00
IUUC-Obr-076527	Oryza brachyantha	50.35	1.00e-35	143.00
IUUC-Ogl-077589	Oryza glaberrima	50.35	3.00e-36	145.00
IUUC-Ogu-078192	Oryza glumaepatula	50.35	5.00e-36	144.00
IUUC-Oin-079645	Oryza indica	54.95	4.00e-34	138.00
IUUC-Olo-080296	Oryza longistaminata	53.66	2.00e-33	135.00
IUUC-Ome-081574	Oryza meridionalis	50.35	4.00e-36	145.00
IUUC-Oni-082269	Oryza nivara	50.35	6.00e-36	144.00
IUUC-Opu-083703	Oryza punctata	50.35	1.00e-35	143.00
IUUC-Oru-084734	Oryza rufipogon	50.70	3.00e-35	142.00
IUUC-Osa-085691	Oryza sativa	50.35	5.00e-36	144.00
IUUC-Olu-087623	Ostreococcus lucimarinus	52.17	6.00e-18	82.80
IUUC-Ppa-095235	Physcomitrella patens	68.12	1.00e-28	120.00
IUUC-Pop-099797	Populus trichocarpa	60.27	8.00e-104	369.00
IUUC-Ppe-101193	Prunus persica	68.36	3.00e-115	407.00
IUUC-Smo-109079	Selaginella moellendorffii	50.56	8.00e-26	110.00
IUUC-Sit-110715	Setaria italica	53.38	8.00e-36	144.00
IUUC-Sly-111147	Solanum lycopersicum	59.43	2.00e-113	401.00
IUUC-Stu-112419	Solanum tuberosum	59.19	3.00e-113	400.00
IUUC-Sbi-114164	Sorghum bicolor	52.31	1.00e-36	146.00
IUUC-Tca-121427	Theobroma cacao	61.48	1.00e-113	402.00
IUUC-Tae-125026	Triticum aestivum	49.29	1.00e-36	147.00
IUUC-Tur-126535	Triticum urartu	56.76	1.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence