iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099200

Ensembl Protein ID

POPTR_0006s21220.1

UniProt Accession

B9H9X7; B9H9X7_POPTR

Genbank Protein ID

EEE92800.1

Protein Name

Rhomboid family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_831984; POPTR_0006s21220g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s21220	POPTR_0006s21220.1	POPTR_0006s21220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.00e-07	32.0	370	407

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e+++++lv+MGFd+ ++  a  aa+++l++Ave L++
   Q: 370  SEEQIQKLVSMGFDKTQVEVAISAADGDLNVAVEILMS 407
           699*********************************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRPNIVTEAG LQTRVGQWWE SIPFLTSAVV VVCGVIYLVC LLIGYDSFYE ICFLPTAVVS 60
HFQVYRIYTS IFFHGSLLHV LFNMLALVPL GSELERIMGS IRLAYLIILL ATTNAIFHLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCAAACGCA AGAGTTTGAT TAAAGAAATT TTAAACAATA AGACCCGAGT TGCAATATGT 60
CTAAATCACA AGGGTCAGAA TATAATTTAT CCAAAAGAAC TCGATCCATG CTATTTTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

KEGG

pop:POPTR_0006s21220g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003104	Amborella trichopoda	60.96	5.00e-142	497.00
IUUC-Aly-006262	Arabidopsis lyrata	70.24	1.00e-149	522.00
IUUC-Ath-006650	Arabidopsis thaliana	69.48	6.00e-148	516.00
IUUC-Afl-008583	Aspergillus flavus	24.21	5.00e-06	44.30
IUUC-Bgr-012264	Blumeria graminis	27.46	4.00e-09	54.70
IUUC-Bci-013845	Botrytis cinerea	24.24	3.00e-08	51.60
IUUC-Bdi-014166	Brachypodium distachyon	61.63	4.00e-140	490.00
IUUC-Bol-015488	Brassica oleracea	69.23	3.00e-156	544.00
IUUC-Bra-017302	Brassica rapa	70.24	5.00e-162	563.00
IUUC-Cre-022648	Chlamydomonas reinhardtii	39.66	1.00e-36	146.00
IUUC-Cme-027293	Cyanidioschyzon merolae	31.80	1.00e-17	83.60
IUUC-Dse-031546	Dothistroma septosporum	26.11	2.00e-06	45.40
IUUC-Dme-032139	Drosophila melanogaster	38.10	1.60e-02	33.90
IUUC-Fox-037841	Fusarium oxysporum	24.29	1.00e-04	39.70
IUUC-Fso-038300	Fusarium solani	26.83	1.00e-09	55.80
IUUC-Gma-043194	Glycine max	75.12	8.00e-171	592.00
IUUC-Hvu-047778	Hordeum vulgare	60.62	3.00e-135	474.00
IUUC-Itr-048333	Ictidomys tridecemlineatus	24.66	3.00e-05	42.00
IUUC-Lch-049560	Latimeria chalumnae	27.32	2.00e-04	39.70
IUUC-Lpe-051525	Leersia perrieri	64.32	1.00e-149	521.00
IUUC-Mtr-058025	Medicago truncatula	71.12	5.00e-166	576.00
IUUC-Mac-064802	Musa acuminata	66.83	3.00e-150	524.00
IUUC-Oba-075871	Oryza barthii	57.73	2.00e-119	422.00
IUUC-Obr-076568	Oryza brachyantha	63.11	1.00e-147	515.00
IUUC-Ogl-077534	Oryza glaberrima	60.63	3.00e-130	457.00
IUUC-Ogu-078204	Oryza glumaepatula	57.49	2.00e-119	421.00
IUUC-Oin-079209	Oryza indica	60.63	3.00e-130	457.00
IUUC-Olo-080827	Oryza longistaminata	44.17	2.00e-34	138.00
IUUC-Oni-082642	Oryza nivara	53.14	2.00e-103	369.00
IUUC-Opu-083685	Oryza punctata	54.48	1.00e-113	402.00
IUUC-Oru-085021	Oryza rufipogon	53.14	2.00e-103	369.00
IUUC-Osa-086297	Oryza sativa	60.63	3.00e-130	457.00
IUUC-Olu-087599	Ostreococcus lucimarinus	32.00	1.00e-28	120.00
IUUC-Pno-095121	Phaeosphaeria nodorum	28.57	3.00e-05	40.80
IUUC-Ppa-095438	Physcomitrella patens	45.65	7.00e-97	347.00
IUUC-Ppe-101907	Prunus persica	73.09	2.00e-173	602.00
IUUC-Sja-107839	Schizosaccharomyces japonicus	29.33	4.00e-09	54.70
IUUC-Ssl-108652	Sclerotinia sclerotiorum	23.81	7.00e-09	53.90
IUUC-Smo-109633	Selaginella moellendorffii	47.51	2.00e-90	325.00
IUUC-Sit-110586	Setaria italica	64.39	6.00e-150	523.00
IUUC-Sly-111682	Solanum lycopersicum	73.01	3.00e-163	567.00
IUUC-Stu-112146	Solanum tuberosum	73.73	4.00e-161	560.00
IUUC-Sbi-114385	Sorghum bicolor	64.48	7.00e-149	519.00
IUUC-Ssc-115544	Sus scrofa	25.32	2.00e-07	48.90
IUUC-Tca-120985	Theobroma cacao	78.99	0.00e+00	654.00
IUUC-Tvi-122530	Trichoderma virens	25.36	1.00e-08	53.10
IUUC-Tae-125486	Triticum aestivum	60.86	1.00e-135	475.00
IUUC-Tur-126741	Triticum urartu	67.86	5.00e-77	280.00
IUUC-Ttr-128782	Tursiops truncatus	24.91	2.00e-08	52.40
IUUC-Vvi-131200	Vitis vinifera	72.51	7.00e-160	556.00
IUUC-Yli-134620	Yarrowia lipolytica	25.13	1.00e-09	56.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence