iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114143

UUCD1 version

UUC-SoB-00219

Ensembl Protein ID

Sb01g045580.1

UniProt Accession

A0A1B6QQ85; A0A1B6QQ85_SORBI

Genbank Protein ID

KXG40075.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G487200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g045580	Sb01g045580.1	Sb01g045580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-07	30.5	197	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ ++++g   ++lpC+Hv+ha+C+ +w       s +  CP+C
   Q: 197  CVICQMEYRRGnlQMTLPCKHVYHASCVTRW------LSINKVCPVC 237
           ****999988866557***************......********** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MNSCRQMELH YINTGFPYTI TESFMDFFEG LTYAHADFAL MDGFQDQGNP YWAMMHTNSY 60
KYGYSGPGNY YTYAHVYDID DYMHRADGGR RVWDNTTPAN NVDSANVVLQ GSEAPRTTAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACAGCT GTCGACAAAT GGAACTCCAC TACATAAACA CTGGATTTCC ATACACAATC 60
ACAGAGAGTT TCATGGATTT CTTTGAGGGT CTCACTTATG CTCATGCTGA CTTTGCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000725	Aegilops tauschii	80.80	2.00e-107	380.00
IUUC-Atr-002639	Amborella trichopoda	56.22	7.00e-74	269.00
IUUC-Aly-006328	Arabidopsis lyrata	48.78	3.00e-62	230.00
IUUC-Ath-006928	Arabidopsis thaliana	49.79	5.00e-62	229.00
IUUC-Bdi-014877	Brachypodium distachyon	84.92	3.00e-110	390.00
IUUC-Bol-015817	Brassica oleracea	47.95	2.00e-57	214.00
IUUC-Bra-017680	Brassica rapa	49.58	5.00e-60	223.00
IUUC-Cin-025552	Ciona intestinalis	39.22	1.00e-16	78.60
IUUC-Gma-043316	Glycine max	51.63	3.00e-69	253.00
IUUC-Hvu-047311	Hordeum vulgare	82.40	3.00e-104	370.00
IUUC-Lpe-051357	Leersia perrieri	81.20	5.00e-111	392.00
IUUC-Mtr-058603	Medicago truncatula	47.84	3.00e-65	240.00
IUUC-Mac-064965	Musa acuminata	61.45	1.00e-84	305.00
IUUC-Oba-075640	Oryza barthii	86.00	2.00e-114	404.00
IUUC-Obr-076687	Oryza brachyantha	86.40	3.00e-115	406.00
IUUC-Ogl-077270	Oryza glaberrima	86.40	5.00e-115	405.00
IUUC-Ogu-078788	Oryza glumaepatula	86.40	2.00e-115	407.00
IUUC-Oin-079201	Oryza indica	86.40	4.00e-115	406.00
IUUC-Olo-080862	Oryza longistaminata	84.34	7.00e-109	385.00
IUUC-Ome-081787	Oryza meridionalis	85.60	7.00e-114	402.00
IUUC-Oni-082723	Oryza nivara	86.40	5.00e-115	405.00
IUUC-Opu-084164	Oryza punctata	86.75	1.00e-115	407.00
IUUC-Oru-084238	Oryza rufipogon	86.40	1.00e-114	404.00
IUUC-Osa-085989	Oryza sativa	86.40	5.00e-115	405.00
IUUC-Pop-099571	Populus trichocarpa	50.40	6.00e-66	242.00
IUUC-Ppe-101485	Prunus persica	54.03	2.00e-63	234.00
IUUC-Sit-110753	Setaria italica	93.98	2.00e-145	506.00
IUUC-Sly-111293	Solanum lycopersicum	50.38	6.00e-66	242.00
IUUC-Stu-112116	Solanum tuberosum	51.60	2.00e-66	244.00
IUUC-Tca-121815	Theobroma cacao	56.05	1.00e-75	275.00
IUUC-Tae-123125	Triticum aestivum	81.20	2.00e-107	380.00
IUUC-Tur-125974	Triticum urartu	81.20	9.00e-108	382.00
IUUC-Vvi-131594	Vitis vinifera	52.44	3.00e-70	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence