iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015157

Ensembl Protein ID

Bo9g007620.1

UniProt Accession

A0A0D3E0A7; A0A0D3E0A7_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g007620	Bo9g007620.1	Bo9g007620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.50e-07	31.0	42	101
E3 activity/RING/RING	2.20e-08	36.0	45	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl.....asggk....tcPvtrqplteedlvPn 58
            f C I l+  ++Pvv+ +G+ +   +I+kwl     +   +    +cPv+++++++++lvP 
   Q: 42   SFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLhvqsdE---HqrhkQCPVCKSKVSHSTLVPL 101
           79******************************885431...24567***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.pglknssskefrCPlCr 46
           C iCl++ ++ p+v+ CgH+f+  C++kw + ++++ +++ +CP+C+
   Q: 45   CNICLDSVQE-PVVTLCGHLFCWPCIHKWlHVQSDEHQRHKQCPVCK 90
           99******99.999***************977778899999*****7 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAMDQSFEDA YGELYGEGAF SFKNNTKPDP ITDSVPSSDD SSFDCNICLD SVQEPVVTLC 60
GHLFCWPCIH KWLHVQSDEH QRHKQCPVCK SKVSHSTLVP LYGRGGGNSQ EKDKSGDVPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCATGG ACCAATCCTT TGAAGATGCT TATGGAGAAC TCTACGGAGA AGGTGCATTC 60
TCTTTCAAGA ACAACACCAA GCCTGACCCA ATCACAGACT CGGTTCCTTC TTCCGATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0032527--P:protein exit from endoplasmic reticulum
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006069	Arabidopsis lyrata	73.82	9.00e-88	315.00
IUUC-Ath-006807	Arabidopsis thaliana	76.69	3.00e-92	330.00
IUUC-Bra-017909	Brassica rapa	92.95	9.00e-120	422.00
IUUC-Gma-043657	Glycine max	48.19	3.00e-42	164.00
IUUC-Lpe-051642	Leersia perrieri	52.17	3.00e-23	102.00
IUUC-Mtr-058147	Medicago truncatula	41.03	7.00e-41	160.00
IUUC-Mvi-060316	Microbotryum violaceum	50.72	8.00e-15	73.60
IUUC-Ppe-101414	Prunus persica	41.60	5.00e-42	164.00
IUUC-Sly-111236	Solanum lycopersicum	41.24	7.00e-36	143.00
IUUC-Tca-121702	Theobroma cacao	44.81	3.00e-52	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence