iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006044

UUCD1 version

UUC-ArL-01260

Ensembl Protein ID

fgenesh1_pg.C_scaffold_6002724

UniProt Accession

D7LYQ3; D7LYQ3_ARALL

Genbank Protein ID

EFH50896.1

Protein Name

Ubiquitin carboxyl-terminal hydrolase family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_352131

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_6002724	fgenesh1_pg.C_scaffold_6002724	fgenesh1_pg.C_scaffold_6002724

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.30e-107	358.1	301	895

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkke 80
           Gl+NlgNtC+mNS+LQcL+++p++ +++l+ ++ ++n++np ++ gel+ ++ +l+++lw+s+ +av+pr+++++l+++
   Q: 301  GLSNLGNTCFMNSALQCLAHTPPIVDYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSR-NAVAPRSFKTKLARF 378
           9**********************************************************9765.69************* PP
   S: 81   aeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsde...aeekkkkknk......slisdlFqgql 150
           a++fsgy+q+D+qE+laflld+l+e+l+k k+kp+ e++++d++  ++     ++ +k +n+      + + d Fqgq+
   Q: 379  APQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVaeeLWNYHKARNDsvivnvCQVFDFFQGQY 457
           ****************************************9966555547775555666666444444778899***** PP
   S: 151  ksqikclecdnvssreepfldlslpvpgkeetkke............................................ 185
           ks+++c+ c+++s +++pf++ls+p+p+  +++++                                            
   Q: 458  KSTLVCPVCGKISITFDPFMYLSVPLPSTLTRSMTvtvfycdgsrlpmpytvtvpkhgsirdlitalgtaccladdesl 536
           ***************************999988889******************************************* PP
   S: 186  ............................................................................... 185
                                                                                          
   Q: 537  llaevydhkifryfenpldslsaikddehivayrlnqmpkgsgnakleilhgglerdvlesvrgrdvklfgtplvtyvn 615
           ******************************************************************************* PP
   S: 186  ............................................................................... 185
                                                                                          
   Q: 616  tdplsgtdidavisgflsplhrvhasskihngsdnghladattdetsaslsspdteiddasdgqlsfrifltderglny 694
           ******************************************************************************* PP
   S: 186  .......................................................slqdcLesftkeeelegenkyyce 209
                                                                  sl +cLe+f +ee l  +++++c+
   Q: 695  kplqsessvspgtitkvlvewnegehetydssylndlpevhktsfsakktrqeaiSLFSCLEAFLAEEPLGPDDMWFCP 773
           ******************************************************************************* PP
   S: 210  kckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHs 287
           +ck++++a+kkl+l+klP++L++hLkRf++s+  + ++ki++ v+fp++ Ldls+++ +++ +   ++ YeL+a+ +H+
   Q: 774  SCKEHRQANKKLDLWKLPDILVFHLKRFTYSR--YLKNKIDTFVNFPIQdLDLSKYVKNKNGQ---SYLYELYAISNHY 847
           ****************************9987..6999*******************996654...8************ PP
   S: 288  GslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkr 337
           G+l++GHY+ay+k  +++ W++fdDs+V++v+e+e+++   s aYvlfY+r
   Q: 848  GGLGGGHYTAYAKLIDDNkWYHFDDSHVSSVNESEIKN---SAAYVLFYRR 895
           *************955555*******************...********98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTIPNSDFMI ENGVCDFPTT PAEEKRIVSE LITESEDNLK EGNLYFVISK RWYASWQKYV 60
EQSTNECLSG ESSRPGAIDN HDIIESESDA NDPQLRRLLV EGVDYVLVPQ EVWKRLVEWY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGATCC CTAATTCCGA TTTCATGATT GAAAACGGAG TCTGTGATTT TCCGACTACT 60
CCTGCCGAAG AGAAACGTAT TGTATCGGAG CTGATTACCG AATCGGAAGA TAATTTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF06337--DUSP
PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_352131

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007560	Arabidopsis thaliana	90.29	0.00e+00	1584.00
IUUC-Ani-009479	Aspergillus nidulans	41.64	3.00e-49	190.00
IUUC-Bgr-012277	Blumeria graminis	41.10	4.00e-57	216.00
IUUC-Bci-013993	Botrytis cinerea	42.24	3.00e-55	210.00
IUUC-Bdi-014013	Brachypodium distachyon	53.67	0.00e+00	935.00
IUUC-Bol-015244	Brassica oleracea	86.01	0.00e+00	1582.00
IUUC-Bra-016885	Brassica rapa	85.81	0.00e+00	1596.00
IUUC-Dse-031432	Dothistroma septosporum	36.94	2.00e-52	201.00
IUUC-Dme-032088	Drosophila melanogaster	29.93	5.00e-61	229.00
IUUC-Fox-037986	Fusarium oxysporum	41.38	2.00e-56	214.00
IUUC-Fso-038291	Fusarium solani	42.62	1.00e-59	225.00
IUUC-Ggr-039740	Gaeumannomyces graminis	40.94	3.00e-56	213.00
IUUC-Gga-040729	Gallus gallus	36.54	8.00e-145	507.00
IUUC-Gma-043077	Glycine max	61.72	0.00e+00	1126.00
IUUC-Hsa-045669	Homo sapiens	36.53	9.00e-144	503.00
IUUC-Lpe-051424	Leersia perrieri	52.67	0.00e+00	932.00
IUUC-Mcc-054881	Macaca mulatta	36.11	3.00e-137	482.00
IUUC-Mor-056985	Magnaporthe oryzae	40.34	6.00e-55	209.00
IUUC-Mpo-057486	Magnaporthe poae	41.95	7.00e-56	212.00
IUUC-Mtr-058138	Medicago truncatula	61.06	0.00e+00	1111.00
IUUC-Mmr-061400	Microcebus murinus	35.64	2.00e-137	482.00
IUUC-Mac-064956	Musa acuminata	56.70	0.00e+00	1005.00
IUUC-Nle-070010	Nomascus leucogenys	36.47	4.00e-144	504.00
IUUC-Ocu-074066	Oryctolagus cuniculus	36.22	7.00e-139	487.00
IUUC-Oba-075427	Oryza barthii	48.76	0.00e+00	795.00
IUUC-Obr-076902	Oryza brachyantha	53.63	0.00e+00	926.00
IUUC-Ogu-078422	Oryza glumaepatula	48.82	0.00e+00	800.00
IUUC-Olo-080315	Oryza longistaminata	53.92	0.00e+00	877.00
IUUC-Ome-081271	Oryza meridionalis	52.86	0.00e+00	916.00
IUUC-Oni-082834	Oryza nivara	48.71	0.00e+00	798.00
IUUC-Opu-083691	Oryza punctata	51.51	0.00e+00	905.00
IUUC-Oru-084820	Oryza rufipogon	48.82	0.00e+00	800.00
IUUC-Osa-086139	Oryza sativa	52.68	0.00e+00	906.00
IUUC-Ola-086553	Oryzias latipes	38.11	3.00e-107	382.00
IUUC-Oga-088424	Otolemur garnettii	35.78	4.00e-136	478.00
IUUC-Ptr-090801	Pan troglodytes	36.78	9.00e-144	503.00
IUUC-Pan-092292	Papio anubis	36.11	2.00e-137	482.00
IUUC-Pop-099801	Populus trichocarpa	60.57	0.00e+00	1074.00
IUUC-Ppe-101587	Prunus persica	61.45	0.00e+00	1065.00
IUUC-Pva-103244	Pteropus vampyrus	35.90	6.00e-135	474.00
IUUC-Ptt-103847	Puccinia triticina	40.00	8.00e-54	205.00
IUUC-Pte-104102	Pyrenophora teres	38.32	6.00e-48	186.00
IUUC-Sja-107748	Schizosaccharomyces japonicus	29.78	1.00e-93	337.00
IUUC-Sit-109948	Setaria italica	54.09	0.00e+00	925.00
IUUC-Sly-111746	Solanum lycopersicum	60.82	0.00e+00	1090.00
IUUC-Stu-112671	Solanum tuberosum	60.83	0.00e+00	1097.00
IUUC-Sbi-114874	Sorghum bicolor	54.77	0.00e+00	963.00
IUUC-Tsy-119414	Tarsius syrichta	45.43	9.00e-78	284.00
IUUC-Tca-121001	Theobroma cacao	62.41	0.00e+00	1160.00
IUUC-Tvi-122422	Trichoderma virens	40.72	3.00e-56	214.00
IUUC-Tae-125295	Triticum aestivum	54.98	0.00e+00	949.00
IUUC-Vvi-131010	Vitis vinifera	60.93	0.00e+00	1115.00
IUUC-Xtr-132305	Xenopus tropicalis	35.17	2.00e-145	509.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence