iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098964

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s10330g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s10330	POPTR_0001s10330.1	POPTR_0001s10330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-24	84.2	810	844

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd..tllvsGsdDgtikvWDlrtgvl 35
           ++ +c+++ s    +l+s ++Dg++k+WD+ tg +
   Q: 810  SKLSCICWnSYikSYLASTGYDGVVKLWDVNTGQV 844
           7789****8435569***************99976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

LGDEVASMDV VEQAHLRGKE SEHSVKPPES SNLLESREMD IAGVDDYRES SFHVLADMLE 60
GKNENRSASP MDASEQPCSS PRSIDDAGNM NEELMVRNFN GSNLAIVGTA NNRERMQTRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGGTGATG AAGTGGCTTC AATGGACGTG GTGGAGCAGG CCCACCTCCG AGGTAAAGAG 60
AGCGAGCATT CCGTGAAACC ACCTGAAAGC TCCAACTTGT TGGAATCTCG TGAAATGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity

KEGG

pop:POPTR_0001s10330g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	49.57	0.00e+00	826.00
IUUC-Atr-002506	Amborella trichopoda	47.89	0.00e+00	812.00
IUUC-Aly-005954	Arabidopsis lyrata	50.00	0.00e+00	998.00
IUUC-Ath-007104	Arabidopsis thaliana	50.36	0.00e+00	990.00
IUUC-Bdi-014698	Brachypodium distachyon	49.61	0.00e+00	784.00
IUUC-Bol-015237	Brassica oleracea	50.83	0.00e+00	971.00
IUUC-Bra-017767	Brassica rapa	49.13	0.00e+00	920.00
IUUC-Gma-044276	Glycine max	57.35	0.00e+00	1090.00
IUUC-Hvu-047750	Hordeum vulgare	48.41	0.00e+00	820.00
IUUC-Lpe-051349	Leersia perrieri	50.06	0.00e+00	830.00
IUUC-Mtr-058593	Medicago truncatula	56.39	0.00e+00	1062.00
IUUC-Mac-065358	Musa acuminata	44.77	0.00e+00	776.00
IUUC-Oba-075097	Oryza barthii	44.97	0.00e+00	677.00
IUUC-Obr-076441	Oryza brachyantha	50.44	0.00e+00	831.00
IUUC-Ogl-077669	Oryza glaberrima	50.78	0.00e+00	828.00
IUUC-Ogu-078009	Oryza glumaepatula	44.33	0.00e+00	673.00
IUUC-Oin-079775	Oryza indica	50.67	0.00e+00	826.00
IUUC-Olo-080230	Oryza longistaminata	42.87	0.00e+00	647.00
IUUC-Ome-081669	Oryza meridionalis	43.98	0.00e+00	668.00
IUUC-Oni-082065	Oryza nivara	44.38	0.00e+00	674.00
IUUC-Opu-083153	Oryza punctata	45.24	0.00e+00	681.00
IUUC-Oru-084928	Oryza rufipogon	44.38	0.00e+00	673.00
IUUC-Osa-085875	Oryza sativa	50.67	0.00e+00	825.00
IUUC-Ppa-096019	Physcomitrella patens	44.33	0.00e+00	662.00
IUUC-Ppe-101771	Prunus persica	61.62	0.00e+00	1251.00
IUUC-Smo-109020	Selaginella moellendorffii	56.59	0.00e+00	676.00
IUUC-Sit-110269	Setaria italica	53.00	0.00e+00	809.00
IUUC-Sly-111360	Solanum lycopersicum	52.22	0.00e+00	1006.00
IUUC-Sbi-114133	Sorghum bicolor	52.08	0.00e+00	791.00
IUUC-Tca-121721	Theobroma cacao	63.00	0.00e+00	1324.00
IUUC-Tae-125695	Triticum aestivum	46.25	0.00e+00	835.00
IUUC-Tur-126357	Triticum urartu	46.47	0.00e+00	771.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence