iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039737

Ensembl Protein ID

GGTG_02978T0

UniProt Accession

J3NNX2; J3NNX2_GAGT3

Genbank Protein ID

EJT77875.1

Protein Name

DNA repair protein rad18

Genbank Nucleotide ID

ADBI01000276

Gene Name

GGTG_02978

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_02978	GGTG_02978T0	GGTG_02978T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.20e-07	29.2	22	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           v ++f+C + ++l   P+++++ +t+   +I++ l+ +gk cP++r+  +e++l  n +lr+ ++a+ +++
   Q: 22   VEQAFRCHVCKDLYDSPMITSCSHTFCSLCIRRSLSVDGK-CPLCRANDQENKLRGNWALREAVDAFTKTR 91
           6789***********************************9.**************************9876 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MDSDVPDSTD WLGTPLAGLM QVEQAFRCHV CKDLYDSPMI TSCSHTFCSL CIRRSLSVDG 60
KCPLCRANDQ ENKLRGNWAL REAVDAFTKT RAALLQVARA PPPAPASPKR KAEDDIEDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCACTTTG AATCCGACGC GAATGGAAGG AACTTGCGAG CGCGTTGAGC TCCTGGAGAC 60
TCGACCGGGG CCGAAGGAAG GGCTTTGGTT CCTGCCACAA CCTTCGCATA TTTGCTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004580--Rad18
IPR003034--SAP_dom
IPR006642--Znf_Rad18_put
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50800--SAP
PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING
SM00513--SAP
SM00734--ZnF_Rad18

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0008270--F:zinc ion binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002086	Ailuropoda melanoleuca	37.35	1.00e-11	63.20
IUUC-Atr-002718	Amborella trichopoda	33.80	2.00e-07	50.10
IUUC-Apl-003657	Anas platyrhynchos	32.00	9.00e-13	66.60
IUUC-Aca-005369	Anolis carolinensis	29.10	1.00e-13	67.00
IUUC-Ath-006986	Arabidopsis thaliana	34.48	6.00e-09	55.10
IUUC-Ago-007876	Ashbya gossypii	40.22	8.00e-20	89.70
IUUC-Acl-008246	Aspergillus clavatus	44.33	2.00e-71	261.00
IUUC-Afl-008666	Aspergillus flavus	42.00	1.00e-75	275.00
IUUC-Afu-009052	Aspergillus fumigatus	42.07	2.00e-75	274.00
IUUC-Ani-009488	Aspergillus nidulans	44.25	1.00e-71	261.00
IUUC-Ang-009681	Aspergillus niger	42.39	9.00e-77	278.00
IUUC-Aor-010037	Aspergillus oryzae	45.00	5.00e-79	286.00
IUUC-Ate-010516	Aspergillus terreus	64.89	1.00e-35	140.00
IUUC-Ame-010630	Astyanax mexicanus	41.77	4.00e-14	70.90
IUUC-Bgr-012178	Blumeria graminis	38.62	6.00e-63	232.00
IUUC-Bta-012976	Bos taurus	38.55	6.00e-12	63.90
IUUC-Bci-013680	Botrytis cinerea	43.17	9.00e-78	282.00
IUUC-Bol-016476	Brassica oleracea	28.00	7.00e-09	54.70
IUUC-Bra-017176	Brassica rapa	28.00	7.00e-09	54.70
IUUC-Cel-018356	Caenorhabditis elegans	46.51	9.00e-10	54.70
IUUC-Cja-019453	Callithrix jacchus	28.87	4.00e-12	64.70
IUUC-Cfa-020856	Canis familiaris	38.55	3.00e-12	65.10
IUUC-Cpo-021950	Cavia porcellus	38.55	9.00e-12	63.20
IUUC-Csa-023997	Chlorocebus sabaeus	37.35	8.00e-12	63.50
IUUC-Cho-024771	Choloepus hoffmanni	38.96	3.00e-11	61.60
IUUC-Cin-025364	Ciona intestinalis	30.67	2.00e-09	55.10
IUUC-Cgl-026668	Colletotrichum gloeosporioides	51.70	2.00e-84	305.00
IUUC-Cme-027202	Cyanidioschyzon merolae	32.61	9.00e-13	66.60
IUUC-Dre-028479	Danio rerio	27.40	5.00e-11	60.80
IUUC-Dno-028943	Dasypus novemcinctus	37.35	9.00e-12	63.20
IUUC-Dor-031046	Dipodomys ordii	28.26	1.00e-09	56.20
IUUC-Dse-031235	Dothistroma septosporum	35.96	1.00e-30	125.00
IUUC-Ete-032503	Echinops telfairi	28.19	5.00e-11	60.80
IUUC-Eca-033725	Equus caballus	37.35	7.00e-12	63.50
IUUC-Eeu-034573	Erinaceus europaeus	38.96	5.00e-11	60.80
IUUC-Fca-036495	Felis catus	37.35	1.00e-11	62.80
IUUC-Fal-036791	Ficedula albicollis	32.00	4.00e-11	61.20
IUUC-Fox-037868	Fusarium oxysporum	47.14	7.00e-78	282.00
IUUC-Fso-038144	Fusarium solani	54.62	9.00e-87	311.00
IUUC-Gmo-039152	Gadus morhua	44.78	8.00e-13	66.20
IUUC-Gga-040788	Gallus gallus	38.55	1.00e-12	66.20
IUUC-Gac-041993	Gasterosteus aculeatus	23.82	4.00e-27	114.00
IUUC-Ggo-044889	Gorilla gorilla	36.17	7.00e-12	63.90
IUUC-Hsa-045957	Homo sapiens	37.35	7.00e-12	63.90
IUUC-Hvu-047067	Hordeum vulgare	38.46	3.00e-08	51.20
IUUC-Itr-048998	Ictidomys tridecemlineatus	37.35	7.00e-12	63.90
IUUC-Kpa-049300	Komagataella pastoris	26.46	1.00e-26	112.00
IUUC-Lch-050172	Latimeria chalumnae	43.66	3.00e-12	63.90
IUUC-Loc-052609	Lepisosteus oculatus	44.58	4.00e-15	74.30
IUUC-Lma-053037	Leptosphaeria maculans	40.74	2.00e-54	205.00
IUUC-Laf-053889	Loxodonta africana	37.66	8.00e-11	60.10
IUUC-Mcc-055853	Macaca mulatta	37.35	6.00e-12	63.90
IUUC-Meu-056866	Macropus eugenii	59.38	3.00e-07	47.80
IUUC-Mor-057071	Magnaporthe oryzae	57.44	5.00e-123	432.00
IUUC-Mpo-057628	Magnaporthe poae	81.84	2.00e-168	583.00
IUUC-Mla-058953	Melampsora laricipopulina	29.59	1.00e-08	53.10
IUUC-Mga-059687	Meleagris gallopavo	40.58	8.00e-11	60.10
IUUC-Mvi-060412	Microbotryum violaceum	27.27	8.00e-25	106.00
IUUC-Mmr-061563	Microcebus murinus	36.14	5.00e-11	60.80
IUUC-Mdo-062655	Monodelphis domestica	40.24	3.00e-13	68.20
IUUC-Mmu-063647	Mus musculus	37.35	2.00e-11	62.80
IUUC-Mpu-065778	Mustela putorius furo	27.16	2.00e-21	95.50
IUUC-Mlu-068205	Myotis lucifugus	37.35	1.00e-11	63.20
IUUC-Nfi-068501	Neosartorya fischeri	41.82	4.00e-77	280.00
IUUC-Ncr-068917	Neurospora crassa	56.25	3.00e-100	357.00
IUUC-Nle-068990	Nomascus leucogenys	37.35	7.00e-12	63.50
IUUC-Opr-071146	Ochotona princeps	38.30	2.00e-12	65.50
IUUC-Ont-071835	Oreochromis niloticus	40.62	1.00e-12	66.20
IUUC-Oan-072827	Ornithorhynchus anatinus	36.56	2.00e-13	67.80
IUUC-Ocu-073986	Oryctolagus cuniculus	39.02	3.00e-12	65.10
IUUC-Ola-086997	Oryzias latipes	40.23	4.00e-13	67.00
IUUC-Olu-087771	Ostreococcus lucimarinus	43.06	1.00e-11	62.80
IUUC-Oga-088092	Otolemur garnettii	38.55	6.00e-12	63.90
IUUC-Oar-089651	Ovis aries	38.55	6.00e-12	63.90
IUUC-Ptr-091103	Pan troglodytes	37.35	7.00e-12	63.90
IUUC-Pan-092478	Papio anubis	36.17	6.00e-12	63.90
IUUC-Psi-093356	Pelodiscus sinensis	39.76	2.00e-12	65.50
IUUC-Pfo-096663	Poecilia formosa	42.35	4.00e-11	61.20
IUUC-Pab-098515	Pongo abelii	36.17	7.00e-12	63.50
IUUC-Pca-100588	Procavia capensis	41.18	2.00e-08	52.40
IUUC-Pva-102377	Pteropus vampyrus	36.25	2.00e-10	59.30
IUUC-Pgr-103556	Puccinia graminis	24.38	1.00e-15	76.60
IUUC-Pte-104362	Pyrenophora teres	34.67	4.00e-49	187.00
IUUC-Pyt-104823	Pyrenophora triticirepentis	35.88	2.00e-52	197.00
IUUC-Rno-105866	Rattus norvegicus	37.35	1.00e-11	63.20
IUUC-Sce-106454	Saccharomyces cerevisiae	38.95	8.00e-20	90.10
IUUC-Sha-107515	Sarcophilus harrisii	30.71	7.00e-14	70.10
IUUC-Sja-107689	Schizosaccharomyces japonicus	44.79	2.00e-23	102.00
IUUC-Spo-108248	Schizosaccharomyces pombe	27.02	2.00e-36	144.00
IUUC-Ssl-108430	Sclerotinia sclerotiorum	43.60	3.00e-75	273.00
IUUC-Stu-112694	Solanum tuberosum	45.45	1.00e-07	48.10
IUUC-Sre-115123	Sporisorium reilianum	28.83	3.00e-15	74.70
IUUC-Ssc-115992	Sus scrofa	31.00	7.00e-10	56.60
IUUC-Tgu-117286	Taeniopygia guttata	38.96	4.00e-12	64.30
IUUC-Tru-117959	Takifugu rubripes	43.37	7.00e-13	66.60
IUUC-Tsy-119286	Tarsius syrichta	42.86	4.00e-09	54.70
IUUC-Tni-120570	Tetraodon nigroviridis	24.67	2.00e-18	84.70
IUUC-Tre-121893	Trichoderma reesei	47.56	4.00e-88	317.00
IUUC-Tvi-122405	Trichoderma virens	52.26	9.00e-88	315.00
IUUC-Tbe-127758	Tupaia belangeri	35.90	2.00e-10	58.50
IUUC-Ttr-128841	Tursiops truncatus	37.35	6.00e-12	63.90
IUUC-Uma-129563	Ustilago maydis	32.33	4.00e-13	67.80
IUUC-Vda-130021	Verticillium dahliae	58.09	5.00e-43	166.00
IUUC-Vpa-130169	Vicugna pacos	38.10	4.00e-12	64.70
IUUC-Vvi-131506	Vitis vinifera	43.18	4.00e-08	49.70
IUUC-Xtr-132308	Xenopus tropicalis	24.58	9.00e-12	62.80
IUUC-Xma-133868	Xiphophorus maculatus	29.10	8.00e-11	60.10
IUUC-Yli-134474	Yarrowia lipolytica	44.58	4.00e-19	87.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence