iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068274

Ensembl Protein ID

CADNFIAP00009579

UniProt Accession

A1CXM4; A1CXM4_NEOFI

Genbank Protein ID

EAW25376.1

Protein Name

SnRNP assembly factor, putative

Genbank Nucleotide ID

DS027685

Gene Name

NFIA_108690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00009819	CADNFIAT00009819	CADNFIAP00009579

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.90e-28	98.7	229	599

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqq 90
           +G++N+ +  Y+N v+Q+L+++ ++r+++l  ++  ++       + el+  + +l+++lw  k  +++vsp+ell+ ++  +++ f+ ++q 
   Q: 229  VGMNNIKANDYLNVVVQVLAHVFPIRNYFLL-HQFPVP------GTPELALRFSTLVRKLWnpKAFRSHVSPHELLQEIALRSSKrFTLTQQS 314
           69*****************************.444444......4579*************999999***********99877666******* PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk..............sqikclecdnvssreepf 169
           D  Efl+++l++l+ +l                       ++k+ +  +s+i+  Fqg+l+               +++  e ++++s++ pf
   Q: 315  DPVEFLSWFLNNLHLSLG---------------------GSKKPSSTPTSVIQAAFQGHLRiesqaitahsdtqnARLVFTESGTINSQTTPF 386
           *****************2.....................34556666667777777777777777777777777789**************** PP
   S: 170  ldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefp..leLd 260
           l l+l++p     +  + ++++ +   +  l++ n +  ++       ++   l+ lP++L +h+kRf  s+++ ++e++ + v+fp  ++Ld
   Q: 387  LILTLDLPPTPLFQSANRESIIPHVPLTTLLNKYNGITASEKL--AHRVRHRLLHPLPPYLLFHIKRF--SKNRFVSERNPTIVTFPspRSLD 475
           **********99999999*************998876665544..44579999***************..888899999999999985456** PP
   S: 261  lspfctspeekqke.....kkkYeLiavvvHsGslssGHYvayvkn..............................................e 302
           +sp+++ + e         +  Y+L+a ++   ++     + ++ +                                              +
   Q: 476  MSPYVEPNPE---IwppgePILYDLVANIILDPTVAAPGTTEDAAEkgltaaggtssagagagservawlvqlhdkamaeenrrhqsqgageQ 565
           *****99332...12344599************887777788888789********9999999999999999999999999998888777532 PP
   S: 303  kgk...WllfdDskVtevkeeevleetgstaYvlfYkrr 338
             +   Wl++ D  V++ + e+  +   +++Y+++++rr
   Q: 566  --QgpeWLEIQDLFVKKAESETLFT---REGYLMVWERR 599
           ..2468*******************...*******9985 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MSKRQAELSL EDEPAVGSPV SKKARVEDEL EEGDPRNGAL PLRRASGQQM EEHERKGQNI 60
LAAADHEEEE MEEAIPENAE VPESSDVDED RPVIAAPKRQ SEPMEGYSDL YLDTINREIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAAGA GACAGGCGGA ACTGTCGCTT GAGGATGAGC CTGCAGTAGG CTCTCCTGTT 60
TCGAAGAAGG CTCGTGTGGA AGACGAGCTT GAAGAAGGCG ACCCCCGCAA CGGAGCATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

KEGG

nfi:NFIA_108690

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	41.30	3.00e-88	317.00
IUUC-Aml-001846	Ailuropoda melanoleuca	40.11	1.00e-99	355.00
IUUC-Atr-002758	Amborella trichopoda	41.26	5.00e-93	333.00
IUUC-Apl-003336	Anas platyrhynchos	41.49	9.00e-46	176.00
IUUC-Aca-004846	Anolis carolinensis	40.35	1.00e-95	342.00
IUUC-Aly-005683	Arabidopsis lyrata	45.25	2.00e-84	304.00
IUUC-Ath-007661	Arabidopsis thaliana	45.00	1.00e-86	312.00
IUUC-Ago-007802	Ashbya gossypii	31.02	3.00e-60	224.00
IUUC-Acl-008304	Aspergillus clavatus	92.51	0.00e+00	1018.00
IUUC-Afl-008735	Aspergillus flavus	89.05	1.00e-118	417.00
IUUC-Afu-009100	Aspergillus fumigatus	98.86	0.00e+00	1091.00
IUUC-Ani-009138	Aspergillus nidulans	82.14	0.00e+00	936.00
IUUC-Ang-009661	Aspergillus niger	83.14	0.00e+00	897.00
IUUC-Aor-010235	Aspergillus oryzae	85.53	0.00e+00	930.00
IUUC-Ate-010346	Aspergillus terreus	80.52	0.00e+00	856.00
IUUC-Ame-011688	Astyanax mexicanus	43.19	8.00e-102	362.00
IUUC-Bgr-011998	Blumeria graminis	61.43	3.00e-168	583.00
IUUC-Bta-013407	Bos taurus	41.43	4.00e-99	353.00
IUUC-Bci-013977	Botrytis cinerea	59.22	2.00e-160	556.00
IUUC-Bdi-014361	Brachypodium distachyon	40.56	2.00e-91	328.00
IUUC-Bol-016317	Brassica oleracea	44.50	5.00e-83	300.00
IUUC-Bra-017190	Brassica rapa	44.50	2.00e-83	301.00
IUUC-Cel-018491	Caenorhabditis elegans	38.37	6.00e-93	333.00
IUUC-Cja-019134	Callithrix jacchus	40.11	1.00e-99	355.00
IUUC-Cfa-020098	Canis familiaris	40.11	1.00e-99	355.00
IUUC-Cpo-021595	Cavia porcellus	40.98	5.00e-99	353.00
IUUC-Csa-024121	Chlorocebus sabaeus	40.11	1.00e-99	355.00
IUUC-Cho-025057	Choloepus hoffmanni	41.58	8.00e-40	155.00
IUUC-Csv-025815	Ciona savignyi	53.44	7.00e-78	282.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	55.50	1.00e-165	574.00
IUUC-Cne-026802	Cryptococcus neoformans	45.24	8.00e-106	375.00
IUUC-Dre-027870	Danio rerio	43.28	5.00e-103	366.00
IUUC-Dno-029655	Dasypus novemcinctus	40.98	4.00e-99	353.00
IUUC-Dor-030762	Dipodomys ordii	41.43	5.00e-99	353.00
IUUC-Dse-031441	Dothistroma septosporum	59.96	1.00e-167	580.00
IUUC-Dme-032101	Drosophila melanogaster	40.26	1.00e-101	362.00
IUUC-Ete-032841	Echinops telfairi	38.65	4.00e-89	320.00
IUUC-Eca-033463	Equus caballus	39.93	5.00e-99	353.00
IUUC-Eeu-034438	Erinaceus europaeus	45.82	7.00e-60	223.00
IUUC-Fca-035774	Felis catus	41.43	4.00e-99	353.00
IUUC-Fal-036988	Ficedula albicollis	42.35	4.00e-102	363.00
IUUC-Fox-037895	Fusarium oxysporum	54.72	1.00e-166	577.00
IUUC-Fso-038450	Fusarium solani	60.23	5.00e-163	565.00
IUUC-Gmo-038874	Gadus morhua	47.60	4.00e-98	350.00
IUUC-Ggr-040115	Gaeumannomyces graminis	52.47	7.00e-153	532.00
IUUC-Gac-041650	Gasterosteus aculeatus	42.38	9.00e-99	352.00
IUUC-Gma-043002	Glycine max	43.69	1.00e-90	325.00
IUUC-Ggo-044707	Gorilla gorilla	37.25	3.00e-84	303.00
IUUC-Hsa-046041	Homo sapiens	40.11	1.00e-99	355.00
IUUC-Hvu-047816	Hordeum vulgare	43.02	3.00e-89	320.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	48.77	3.00e-86	310.00
IUUC-Lch-050419	Latimeria chalumnae	42.19	3.00e-104	370.00
IUUC-Lpe-051593	Leersia perrieri	40.67	3.00e-91	327.00
IUUC-Loc-052930	Lepisosteus oculatus	40.99	4.00e-103	366.00
IUUC-Lma-053256	Leptosphaeria maculans	58.61	0.00e+00	629.00
IUUC-Laf-053555	Loxodonta africana	39.74	6.00e-98	349.00
IUUC-Mcc-055630	Macaca mulatta	40.11	1.00e-99	355.00
IUUC-Meu-056579	Macropus eugenii	33.88	4.00e-42	164.00
IUUC-Mor-057078	Magnaporthe oryzae	58.13	8.00e-153	531.00
IUUC-Mpo-057607	Magnaporthe poae	50.09	1.00e-130	458.00
IUUC-Mtr-058644	Medicago truncatula	45.04	4.00e-89	320.00
IUUC-Mla-059120	Melampsora laricipopulina	43.49	2.00e-119	421.00
IUUC-Mvi-060429	Microbotryum violaceum	54.17	3.00e-88	317.00
IUUC-Mmr-061313	Microcebus murinus	41.43	4.00e-99	353.00
IUUC-Mdo-062801	Monodelphis domestica	39.96	2.00e-99	354.00
IUUC-Mmu-064424	Mus musculus	42.03	2.00e-103	367.00
IUUC-Mac-065115	Musa acuminata	40.40	3.00e-93	333.00
IUUC-Mpu-065980	Mustela putorius furo	37.72	6.00e-76	276.00
IUUC-Mlu-067007	Myotis lucifugus	41.43	4.00e-99	353.00
IUUC-Ncr-068829	Neurospora crassa	61.85	9.00e-164	568.00
IUUC-Nle-069171	Nomascus leucogenys	41.43	2.00e-98	350.00
IUUC-Opr-070494	Ochotona princeps	37.15	3.00e-73	267.00
IUUC-Ont-072290	Oreochromis niloticus	42.33	3.00e-102	363.00
IUUC-Oan-073099	Ornithorhynchus anatinus	41.83	2.00e-99	353.00
IUUC-Ocu-074642	Oryctolagus cuniculus	39.93	2.00e-99	354.00
IUUC-Oba-075886	Oryza barthii	39.50	2.00e-90	324.00
IUUC-Obr-076220	Oryza brachyantha	39.62	4.00e-91	327.00
IUUC-Ogl-077682	Oryza glaberrima	39.50	9.00e-91	325.00
IUUC-Ogu-078492	Oryza glumaepatula	39.31	2.00e-90	325.00
IUUC-Oin-079956	Oryza indica	39.50	8.00e-91	325.00
IUUC-Olo-080239	Oryza longistaminata	39.95	4.00e-74	271.00
IUUC-Ome-081573	Oryza meridionalis	39.73	3.00e-92	330.00
IUUC-Oni-082975	Oryza nivara	39.50	8.00e-91	325.00
IUUC-Opu-083724	Oryza punctata	44.44	7.00e-92	329.00
IUUC-Oru-084566	Oryza rufipogon	39.50	8.00e-91	325.00
IUUC-Osa-086008	Oryza sativa	39.50	8.00e-91	325.00
IUUC-Ola-086967	Oryzias latipes	42.06	3.00e-100	357.00
IUUC-Olu-087614	Ostreococcus lucimarinus	40.25	1.00e-64	238.00
IUUC-Oga-088047	Otolemur garnettii	40.59	7.00e-66	243.00
IUUC-Oar-089393	Ovis aries	39.93	4.00e-99	353.00
IUUC-Ptr-090561	Pan troglodytes	40.11	1.00e-99	355.00
IUUC-Pan-091812	Papio anubis	40.11	1.00e-99	355.00
IUUC-Psi-093507	Pelodiscus sinensis	35.12	7.00e-43	165.00
IUUC-Pno-095104	Phaeosphaeria nodorum	56.77	4.00e-178	615.00
IUUC-Ppa-095995	Physcomitrella patens	41.14	2.00e-94	338.00
IUUC-Pfo-096754	Poecilia formosa	42.80	3.00e-104	370.00
IUUC-Pab-098053	Pongo abelii	40.11	1.00e-99	355.00
IUUC-Pop-099230	Populus trichocarpa	45.99	3.00e-93	333.00
IUUC-Pca-100407	Procavia capensis	36.93	3.00e-73	267.00
IUUC-Ppe-101699	Prunus persica	40.89	6.00e-92	329.00
IUUC-Pva-103159	Pteropus vampyrus	39.19	3.00e-91	327.00
IUUC-Pgr-103433	Puccinia graminis	44.83	1.00e-119	422.00
IUUC-Ptt-103701	Puccinia triticina	41.25	2.00e-101	361.00
IUUC-Pte-104281	Pyrenophora teres	59.20	0.00e+00	637.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	58.86	0.00e+00	633.00
IUUC-Rno-105531	Rattus norvegicus	40.67	7.00e-104	369.00
IUUC-Sce-106368	Saccharomyces cerevisiae	29.23	5.00e-52	196.00
IUUC-Sha-107093	Sarcophilus harrisii	41.63	5.00e-99	353.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	47.07	9.00e-126	441.00
IUUC-Spo-108018	Schizosaccharomyces pombe	47.76	1.00e-124	437.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	57.45	1.00e-152	531.00
IUUC-Smo-108892	Selaginella moellendorffii	45.34	4.00e-90	323.00
IUUC-Sit-110782	Setaria italica	41.58	1.00e-92	332.00
IUUC-Sly-111308	Solanum lycopersicum	40.80	6.00e-102	362.00
IUUC-Stu-112447	Solanum tuberosum	42.40	1.00e-101	362.00
IUUC-Sar-113352	Sorex araneus	42.66	1.00e-73	268.00
IUUC-Sbi-114806	Sorghum bicolor	47.69	1.00e-92	332.00
IUUC-Sre-115059	Sporisorium reilianum	39.59	3.00e-92	330.00
IUUC-Ssc-115677	Sus scrofa	46.28	5.00e-88	316.00
IUUC-Tru-118478	Takifugu rubripes	42.27	2.00e-101	361.00
IUUC-Tsy-119082	Tarsius syrichta	38.86	3.00e-63	233.00
IUUC-Tni-120419	Tetraodon nigroviridis	41.86	8.00e-97	345.00
IUUC-Tca-121294	Theobroma cacao	46.23	5.00e-99	353.00
IUUC-Tre-121962	Trichoderma reesei	60.35	1.00e-160	557.00
IUUC-Tvi-122280	Trichoderma virens	54.88	3.00e-167	579.00
IUUC-Tae-125873	Triticum aestivum	47.42	3.00e-93	334.00
IUUC-Tur-126551	Triticum urartu	41.92	6.00e-93	332.00
IUUC-Tme-126959	Tuber melanosporum	58.08	8.00e-157	545.00
IUUC-Tbe-127737	Tupaia belangeri	40.69	1.00e-94	338.00
IUUC-Ttr-129211	Tursiops truncatus	50.74	3.00e-76	277.00
IUUC-Uma-129591	Ustilago maydis	38.94	7.00e-99	353.00
IUUC-Vda-129674	Verticillium dahliae	54.32	3.00e-160	556.00
IUUC-Vpa-130793	Vicugna pacos	37.40	9.00e-82	295.00
IUUC-Xtr-132430	Xenopus tropicalis	41.15	2.00e-99	354.00
IUUC-Xma-133515	Xiphophorus maculatus	42.80	4.00e-104	370.00
IUUC-Yli-134488	Yarrowia lipolytica	38.18	2.00e-86	310.00
IUUC-Zma-134748	Zea mays	45.01	4.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence