iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002597

Ensembl Protein ID

ERN10896

UniProt Accession

W1PT56; W1PT56_AMBTC

Genbank Protein ID

ERN10896.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392771

Gene Name

AMTR_s00167p00079760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00167p00079760	ERN10896	ERN10896

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	59.84	2.00e-34	142.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MKRPSIEETD SISTVKKQRI SSGEEEEGEQ KGRFFQEGGG EGGEGRSNGG FRLDDDLLFE 60
VLKHVDARSL ATASCVSHQW HRAAQDERLW EIVCTRHWTN IGCGNQQLRS VVLALGGFRR 120

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Nucleotide Sequence
(Fasta)

ATGAAGAGGC CATCAATTGA AGAAACGGAC TCCATTTCCA CGGTGAAGAA GCAAAGAATT 60
TCATCAGGTG AGGAAGAAGA AGGAGAGCAA AAGGGGAGAT TTTTCCAGGA AGGAGGAGGA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010162--P:seed dormancy process
GO:0009845--P:seed germination

KEGG

atr:18439073

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006435	Arabidopsis lyrata	58.02	3.00e-35	139.00
IUUC-Ath-007482	Arabidopsis thaliana	58.78	3.00e-36	142.00
IUUC-Bdi-014906	Brachypodium distachyon	46.83	2.00e-24	104.00
IUUC-Bol-016273	Brassica oleracea	59.40	2.00e-30	123.00
IUUC-Bra-016627	Brassica rapa	59.40	1.00e-30	123.00
IUUC-Gma-043301	Glycine max	61.15	1.00e-36	144.00
IUUC-Hsa-046251	Homo sapiens	39.13	1.00e-04	38.10
IUUC-Hvu-047070	Hordeum vulgare	45.24	2.00e-23	101.00
IUUC-Lpe-050816	Leersia perrieri	47.62	3.20e-01	26.90
IUUC-Mtr-057791	Medicago truncatula	64.34	7.00e-37	145.00
IUUC-Mac-064781	Musa acuminata	56.52	1.00e-33	134.00
IUUC-Opr-070849	Ochotona princeps	35.19	2.00e-04	38.10
IUUC-Oan-072882	Ornithorhynchus anatinus	35.19	2.00e-04	37.70
IUUC-Obr-076578	Oryza brachyantha	44.20	4.00e-26	110.00
IUUC-Ogl-077389	Oryza glaberrima	46.83	1.00e-16	78.60
IUUC-Oin-079212	Oryza indica	46.83	1.00e-16	78.60
IUUC-Ola-086608	Oryzias latipes	37.50	7.00e-05	40.80
IUUC-Pop-098990	Populus trichocarpa	62.86	7.00e-41	158.00
IUUC-Ppe-102068	Prunus persica	61.59	7.00e-40	155.00
IUUC-Smo-108701	Selaginella moellendorffii	47.62	2.00e-22	97.10
IUUC-Sit-110635	Setaria italica	55.88	8.00e-19	85.90
IUUC-Sly-111686	Solanum lycopersicum	59.09	4.00e-25	106.00
IUUC-Stu-111934	Solanum tuberosum	55.40	2.00e-24	103.00
IUUC-Sbi-113872	Sorghum bicolor	57.35	5.00e-15	73.20
IUUC-Tca-121336	Theobroma cacao	61.31	9.00e-40	154.00
IUUC-Tre-121945	Trichoderma reesei	35.00	4.00e-03	35.40
IUUC-Tae-124891	Triticum aestivum	36.54	1.00e-06	44.70
IUUC-Vvi-131285	Vitis vinifera	67.15	1.00e-38	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence