iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043531

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000834

Gene Name

LOC100784832; GLYMA_01G131800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G32430	GLYMA01G32430.1	GLYMA01G32430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-33	115.5	273	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++++CpIslelMrdPvv+++G+tydr+sI+ w++sg++tcP+t+q+l++++l+Pn +lr++i awc e+++
   Q: 273  IPADYRCPISLELMRDPVVVATGQTYDRASIKLWMDSGHNTCPKTGQTLSHTELIPNRVLRNMIAAWCREQRI 345
           89******************************************************************99875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAISPETFPT RKRRPENMAS FMSPKINDLN VLCSLLQLTD QICSLNLTTT LLNRVSSSTI 60
RKTQLLGVVF EELVRVSNLN SNSSVLFLCL EEMYIVLHNI KILIEDFSNG SKFNLLMQIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCAATTGT TTTATTTTAT GGATAAATAT GCACACATGA CACATCTCAT ATTTTTTTAA 60
TGCCTGTATT ATTTAAGTCT TTATTGTTAT TTTTTTGTGC CGTCATCTAC AATGAAAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100784832

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	48.59	6.00e-70	258.00
IUUC-Aly-005828	Arabidopsis lyrata	56.27	0.00e+00	644.00
IUUC-Ath-007101	Arabidopsis thaliana	57.16	0.00e+00	654.00
IUUC-Bdi-014833	Brachypodium distachyon	44.86	2.00e-96	347.00
IUUC-Bol-015511	Brassica oleracea	54.26	0.00e+00	656.00
IUUC-Bra-017197	Brassica rapa	54.41	0.00e+00	658.00
IUUC-Hvu-047557	Hordeum vulgare	45.70	4.00e-108	385.00
IUUC-Lpe-051445	Leersia perrieri	43.28	2.00e-102	366.00
IUUC-Mtr-058241	Medicago truncatula	73.40	0.00e+00	830.00
IUUC-Mac-065033	Musa acuminata	45.79	2.00e-106	380.00
IUUC-Oba-075591	Oryza barthii	44.06	1.00e-106	380.00
IUUC-Obr-076747	Oryza brachyantha	48.91	3.00e-101	362.00
IUUC-Ogl-077709	Oryza glaberrima	44.06	1.00e-106	380.00
IUUC-Ogu-078626	Oryza glumaepatula	44.06	2.00e-106	380.00
IUUC-Oin-080113	Oryza indica	43.90	1.00e-106	380.00
IUUC-Olo-080301	Oryza longistaminata	39.47	4.00e-66	245.00
IUUC-Ome-081924	Oryza meridionalis	44.66	3.00e-109	389.00
IUUC-Oni-082284	Oryza nivara	44.06	2.00e-106	380.00
IUUC-Opu-083971	Oryza punctata	44.93	2.00e-106	379.00
IUUC-Oru-084898	Oryza rufipogon	43.90	3.00e-114	405.00
IUUC-Osa-085986	Oryza sativa	45.66	2.00e-104	372.00
IUUC-Olu-087884	Ostreococcus lucimarinus	58.21	1.00e-23	100.00
IUUC-Pop-099292	Populus trichocarpa	57.65	0.00e+00	745.00
IUUC-Ppe-101643	Prunus persica	61.52	0.00e+00	782.00
IUUC-Sit-110652	Setaria italica	44.22	3.00e-119	422.00
IUUC-Sly-111346	Solanum lycopersicum	61.05	0.00e+00	748.00
IUUC-Stu-112435	Solanum tuberosum	60.88	0.00e+00	719.00
IUUC-Sbi-114339	Sorghum bicolor	45.71	2.00e-102	366.00
IUUC-Tca-121203	Theobroma cacao	63.70	0.00e+00	788.00
IUUC-Tae-124205	Triticum aestivum	45.16	5.00e-100	358.00
IUUC-Vvi-131545	Vitis vinifera	61.42	0.00e+00	676.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence