iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120978

Ensembl Protein ID

EOX92004

UniProt Accession

A0A061DHM5; A0A061DHM5_THECC

Genbank Protein ID

EOX92004.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001879

Gene Name

TCM_001032

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_001032	EOX92004	EOX92004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.80e-08	33.9	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh+ C+  w       + + +CPlCr
   Q: 144  CSVCLNEFqeDESLRLLPkCSHAFHLPCIDTW------LRSHKNCPLCR 186
           ********7655599999**************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MARRGQLRDC EHKHVALTLT PRPLPPKPPL PCSPPPPQNS SYKQGNVMIT GVIVIGSMLS 60
TALLIAIFCA LVRSYFIRRN RSRRSMPLFF GTQEDFLDED RGPEPHLDNP IWYINTIGLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGGCAA AGGGAAAGCC AAACTTCCTG GTCACACCAT TAATTCTAAC CCCCAGCCTA 60
TGGCGAGGGA TGGTAAACAA AAAAGTAAAG CTAAAAGCTA TTTCATAATC TCTTCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006749	Arabidopsis thaliana	65.05	3.00e-36	144.00
IUUC-Bdi-014119	Brachypodium distachyon	62.03	2.00e-27	115.00
IUUC-Lpe-051048	Leersia perrieri	46.09	1.00e-29	123.00
IUUC-Mtr-057999	Medicago truncatula	63.08	3.00e-44	171.00
IUUC-Ogl-077013	Oryza glaberrima	56.00	4.00e-27	114.00
IUUC-Ogu-078886	Oryza glumaepatula	55.00	6.00e-27	114.00
IUUC-Oin-079205	Oryza indica	56.00	3.00e-27	115.00
IUUC-Ome-081516	Oryza meridionalis	56.00	2.00e-27	115.00
IUUC-Oni-082231	Oryza nivara	56.00	3.00e-27	115.00
IUUC-Opu-084102	Oryza punctata	61.25	2.00e-29	122.00
IUUC-Oru-085019	Oryza rufipogon	56.00	3.00e-27	115.00
IUUC-Osa-085718	Oryza sativa	56.00	2.00e-27	115.00
IUUC-Ola-087452	Oryzias latipes	45.33	3.00e-14	73.20
IUUC-Pop-098897	Populus trichocarpa	50.62	4.00e-79	287.00
IUUC-Ppe-101478	Prunus persica	54.65	4.00e-79	287.00
IUUC-Tae-123532	Triticum aestivum	51.92	6.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence