iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109595

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

GL377588

Gene Name

SELMODRAFT_100312

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_100312	EFJ24797	EFJ24797

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-74	252.4	186	533

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavspre...........llkalkkeaeefsgyeqqD 91
           Gl+N+g tC+mNSvLQ+L+++p+lr+++l     ++++++  ++k +l + + ++f++  +++++ +sp +           +l++ ++ a ++ gyeqqD
   Q: 186  GLTNMGSTCFMNSVLQALLHTPPLRSYFLG----HCHNKAACQSKVCLGCDMDDMFAAAFSGDRTPYSPAQflyrrylflfsFLNSWWQHAANLAGYEQQD 282
           9*****************************....77777778899********************999999999999999999****************** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.....sl 187
           a++f+   +++++ + ++                   e ++ ++ + +++++++F g l+s+++c +c+ +s++++p +d+sl++++   +k+      +l
   Q: 283  AHDFFISAVEGIHANSQQ------------------PELRKGNDAECRCIVHRVFSGLLRSDVTCTACGFTSTKNDPCVDISLDLESTALEKQIyasssTL 365
           ****************22..................33456778999***************************************7775544467777** PP
   S: 188  qdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts..................... 267
             cL+ ft++e+l ++++++ce+c+++qea+k+++++klP vL++h kRf+ s   k+ +k++++v+fpl+L+++ +++s                     
   Q: 366  LGCLDRFTRPERLGSNERFFCESCQSRQEAVKQMSVRKLPVVLCFHVKRFEHSA--KNYRKVDTYVQFPLSLNMACYLSSsiarlrhgnrlifvegkgelg 464
           **************************************************6655..5777*******************9777777777777777777777 PP
   S: 268  ...peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
              ++ + + + ++eL+avv+HsG+l++GHYvay +   g+W+++dD  +t v e+ v     ++aY+l+Y +
   Q: 465  gdnDSGSTSPSSEFELFAVVSHSGKLDGGHYVAYLRL-GGEWYKCDDAWITRVGESVVRA---TQAYMLYYVQ 533
           766333344499*************************.999*************999999...********76 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVTKSSSPCY RPCEHLVDYK SKHSTRGFRA LQRCIVVLPP GRPSVRTLSC DEDPVPRCAS 60
CAKSHGRLYA CLICSTISCY SSSSSHARSH ALELPGHELA IDLDRAELFC CICNDQVYDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGACTA AATCGTCGTC GCCATGCTAT CGCCCCTGCG AGCACCTGGT GGACTACAAA 60
TCCAAGCACA GCACCCGGGG CTTCCGCGCG CTCCAGCGAT GCATCGTCGT CCTCCCACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_100312

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006565	Arabidopsis lyrata	47.32	3.00e-118	417.00
IUUC-Ath-007536	Arabidopsis thaliana	46.69	3.00e-117	414.00
IUUC-Afl-008464	Aspergillus flavus	32.73	2.00e-57	215.00
IUUC-Afu-008912	Aspergillus fumigatus	31.08	1.00e-57	216.00
IUUC-Ani-009168	Aspergillus nidulans	33.33	8.00e-64	236.00
IUUC-Ang-009694	Aspergillus niger	32.80	1.00e-65	243.00
IUUC-Aor-010035	Aspergillus oryzae	35.34	6.00e-43	166.00
IUUC-Ate-010382	Aspergillus terreus	32.27	4.00e-59	221.00
IUUC-Bgr-012150	Blumeria graminis	29.36	4.00e-48	185.00
IUUC-Bol-016509	Brassica oleracea	48.13	3.00e-119	422.00
IUUC-Bra-016962	Brassica rapa	49.19	1.00e-110	392.00
IUUC-Cho-024863	Choloepus hoffmanni	30.59	3.00e-25	108.00
IUUC-Cin-025109	Ciona intestinalis	34.25	3.00e-58	218.00
IUUC-Cme-027115	Cyanidioschyzon merolae	28.61	4.00e-26	113.00
IUUC-Dor-030832	Dipodomys ordii	44.94	1.00e-39	156.00
IUUC-Eeu-034814	Erinaceus europaeus	40.27	5.00e-40	158.00
IUUC-Gmo-038474	Gadus morhua	40.38	6.00e-60	224.00
IUUC-Gma-042897	Glycine max	48.57	1.00e-142	499.00
IUUC-Mtr-057769	Medicago truncatula	48.99	6.00e-142	496.00
IUUC-Mla-059185	Melampsora laricipopulina	26.11	1.00e-38	153.00
IUUC-Mvi-060530	Microbotryum violaceum	35.47	5.00e-53	201.00
IUUC-Nfi-068423	Neosartorya fischeri	31.08	4.00e-58	218.00
IUUC-Nle-069084	Nomascus leucogenys	37.83	4.00e-82	297.00
IUUC-Olo-080811	Oryza longistaminata	54.45	2.00e-80	291.00
IUUC-Ola-086743	Oryzias latipes	40.20	9.00e-81	293.00
IUUC-Pgr-103657	Puccinia graminis	26.25	9.00e-34	137.00
IUUC-Sha-107538	Sarcophilus harrisii	38.86	2.00e-41	160.00
IUUC-Sly-111077	Solanum lycopersicum	48.91	3.00e-141	494.00
IUUC-Stu-112203	Solanum tuberosum	51.66	7.00e-126	442.00
IUUC-Sre-115195	Sporisorium reilianum	32.82	3.00e-32	132.00
IUUC-Tca-121716	Theobroma cacao	50.91	1.00e-149	522.00
IUUC-Tme-127115	Tuber melanosporum	33.92	8.00e-67	247.00
IUUC-Tbe-127423	Tupaia belangeri	31.36	1.00e-26	113.00
IUUC-Uma-129455	Ustilago maydis	31.95	7.00e-33	134.00
IUUC-Vda-129829	Verticillium dahliae	32.40	6.00e-37	146.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence