iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099126

Ensembl Protein ID

POPTR_0008s20990.1

UniProt Accession

B9HMP9; B9HMP9_POPTR

Genbank Protein ID

EEE90125.2

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_565361; POPTR_0008s20990g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s20990	POPTR_0008s20990.1	POPTR_0008s20990.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	80.67	7.00e-132	466.00	IUUC-Ath-006798

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESTPVSNER LDFGKMGYGC QHYRRRCQIR APCCNEIFTC RHCHNEATNM LKNFCDRHEL 60
NRYDVKQVIC AVCDTEQPVA QVCTNCGVNM GEYFCEICKF FDDDTAKGQF HCDDCGICRV 120

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Nucleotide Sequence
(Fasta)

CCTTTGTGCA CCCCTGGTCT TTCCTTCCTC TTTCTCTCTA CTTCTTCATT TTTTTATCCT 60
CTCATCCATT CCTCCATAAC TCATGGAATC CACTCCTGTT TCCAATGAAC GTCTTGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR031109--Rinc_finger_CHY_Zinc_plant
IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:1900425--P:negative regulation of defense response to bacterium
GO:1901485--P:positive regulation of transcription factor catabolic process

KEGG

pop:POPTR_0008s20990g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002810	Amborella trichopoda	71.09	4.00e-114	403.00
IUUC-Aly-005693	Arabidopsis lyrata	81.04	7.00e-134	469.00
IUUC-Ath-006798	Arabidopsis thaliana	80.67	4.00e-133	466.00
IUUC-Bta-013191	Bos taurus	45.00	1.00e-60	225.00
IUUC-Bdi-014453	Brachypodium distachyon	66.53	7.00e-102	362.00
IUUC-Bol-015451	Brassica oleracea	82.16	4.00e-133	466.00
IUUC-Bra-017136	Brassica rapa	82.90	9.00e-135	471.00
IUUC-Cin-025667	Ciona intestinalis	46.37	4.00e-65	240.00
IUUC-Csv-025807	Ciona savignyi	44.62	1.00e-64	238.00
IUUC-Gma-044156	Glycine max	85.50	3.00e-136	476.00
IUUC-Hvu-047085	Hordeum vulgare	67.06	8.00e-102	362.00
IUUC-Lch-050661	Latimeria chalumnae	44.44	3.00e-61	227.00
IUUC-Lpe-051107	Leersia perrieri	68.67	4.00e-102	363.00
IUUC-Mtr-057867	Medicago truncatula	82.53	4.00e-134	469.00
IUUC-Mac-065603	Musa acuminata	73.98	6.00e-121	426.00
IUUC-Mpu-065859	Mustela putorius furo	43.10	4.00e-24	102.00
IUUC-Oan-073381	Ornithorhynchus anatinus	44.78	5.00e-55	206.00
IUUC-Oba-075296	Oryza barthii	67.84	7.00e-104	369.00
IUUC-Obr-076751	Oryza brachyantha	68.55	2.00e-101	360.00
IUUC-Ogl-077845	Oryza glaberrima	67.84	7.00e-104	369.00
IUUC-Ogu-078026	Oryza glumaepatula	63.18	3.00e-96	343.00
IUUC-Oin-079551	Oryza indica	63.85	3.00e-98	350.00
IUUC-Olo-080782	Oryza longistaminata	66.15	4.00e-102	364.00
IUUC-Ome-081602	Oryza meridionalis	67.45	4.00e-103	367.00
IUUC-Oni-082797	Oryza nivara	67.84	5.00e-104	370.00
IUUC-Opu-083572	Oryza punctata	67.06	1.00e-102	365.00
IUUC-Oru-085188	Oryza rufipogon	67.84	1.00e-105	376.00
IUUC-Osa-085573	Oryza sativa	67.84	6.00e-104	369.00
IUUC-Oar-089298	Ovis aries	43.24	1.00e-60	225.00
IUUC-Ppe-101325	Prunus persica	86.31	7.00e-139	485.00
IUUC-Sit-110031	Setaria italica	65.49	7.00e-103	366.00
IUUC-Sly-111421	Solanum lycopersicum	81.68	5.00e-130	456.00
IUUC-Stu-112471	Solanum tuberosum	82.06	7.00e-132	462.00
IUUC-Sbi-114253	Sorghum bicolor	65.87	2.00e-101	361.00
IUUC-Tni-120395	Tetraodon nigroviridis	46.22	2.00e-57	215.00
IUUC-Tca-121199	Theobroma cacao	86.80	2.00e-131	460.00
IUUC-Tae-125231	Triticum aestivum	67.21	7.00e-100	356.00
IUUC-Vvi-131409	Vitis vinifera	83.65	3.00e-135	473.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence