iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114549

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G176000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g022020	Sb08g022020.1	Sb08g022020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.40e-108	361.3	276	872

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           tGl NlgNtC+mNS++QcL+++++l +++l  +++++n  np ++kgel++++ +l+++lw  +++ v+pr++++ l+++a++fsg++q+D+qE+l
   Q: 276  TGLDNLGNTCFMNSAVQCLAHTSKLVDYFLGDFHKEINPHNPLGMKGELACAFGDLLRKLWAIDRTPVAPRQFKSRLGRFAPQFSGFNQHDSQELL 371
           7*********************************************************************************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.... 185
           aflld+l+e+l++ k kp++e++++d   ++e  de + ++  +n+s+i+d+ qgq+ks+++c+ c++vs++++pf++lslp+p  + + ++    
   Q: 372  AFLLDGLHEDLNRVKCKPYSEAKDSDgrpDEEVADEYWGNHLARNDSIIVDICQGQYKSTLVCPICKKVSVTFDPFMYLSLPLPTTTMRTMTitvf 467
           *********************9999822234555569**************************************************88777**** PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 468  stdgtsgpspytisvpksgdtrtlintlsnacslrdderllvaevynnsliryldepsevislirdgdrlvayrlpkdnedapivvfrnqrmessl 563
           ************************************************************************************************ PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 564  anfgrkswktfgtplvsslpdtitgsticnlflkvmtpfrvsrddvpaavktvgesslvdeiadsnmsadasepttinnnsvedetgtedvmqffl 659
           ************************************************************************************************ PP
   S: 186  ..................................................................slqdcLesftkeeelegenkyycekckkkq 215
                                                                             sl  cLe+f kee l  e+++yc+ ck++q
   Q: 660  tnerfpdqrmkiemdlsitvkdphkrlhvavcwedngldqydldsldslpevykavlfsrrpqdtcSLYACLEAFIKEEPLGPEDMWYCPGCKEHQ 755
           ************************************************************************************************ PP
   S: 216  eaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.Wllf 309
           +a+kkl+l++lPe+Li+hLkR+s+s+  + + k+++ v+fp++ Ldls++  ++++++  +++Y+L+a+ +H+Gsl++GHY+ayv++e +k W+ f
   Q: 756  QASKKLDLWRLPEILIIHLKRCSYSR--YTKYKLETFVDFPIHdLDLSKYIGHRCQDV--PHNYRLYAISNHYGSLGGGHYTAYVYHEGKKgWYDF 847
           **********************9988..5888*********************99888..***************************77768**** PP
   S: 310  dDskVtevkeeevleetgstaYvlfYkr 337
           dD +V +++e+++++   s aYvlfY+r
   Q: 848  DDRHVGPITEDSIKT---SAAYVLFYRR 872
           ***************...********98 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPAPPDPPPL PAPAPDPDPS DPAAAPAPAA ADEEEDDDRV FLVPLRWWKE AQEGSAIEAP 60
GLPYTATPAG PASYGMRVLS MFLSDQTYTL RRADELLEQT ASASARSYAL LPADLFAKAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGCGC CCCCGGACCC GCCGCCGCTC CCCGCGCCGG CTCCGGACCC GGACCCGTCG 60
GATCCCGCCG CCGCGCCGGC CCCCGCCGCC GCCGATGAGG AGGAGGACGA CGACCGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_08g022020

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000425	Aegilops tauschii	77.53	0.00e+00	874.00
IUUC-Atr-002955	Amborella trichopoda	52.63	0.00e+00	840.00
IUUC-Aly-005456	Arabidopsis lyrata	51.08	0.00e+00	780.00
IUUC-Ath-007677	Arabidopsis thaliana	49.12	0.00e+00	748.00
IUUC-Ago-007911	Ashbya gossypii	40.98	2.00e-61	231.00
IUUC-Ame-010757	Astyanax mexicanus	39.94	5.00e-128	451.00
IUUC-Bdi-014404	Brachypodium distachyon	72.39	0.00e+00	1259.00
IUUC-Bol-015699	Brassica oleracea	52.97	0.00e+00	817.00
IUUC-Bra-017554	Brassica rapa	52.97	0.00e+00	815.00
IUUC-Cme-027338	Cyanidioschyzon merolae	35.81	7.00e-93	334.00
IUUC-Dor-030384	Dipodomys ordii	35.48	8.00e-113	400.00
IUUC-Ete-032639	Echinops telfairi	34.40	2.00e-74	273.00
IUUC-Gma-043629	Glycine max	53.55	0.00e+00	834.00
IUUC-Kpa-049332	Komagataella pastoris	41.09	4.00e-59	222.00
IUUC-Lpe-051047	Leersia perrieri	80.34	0.00e+00	1365.00
IUUC-Loc-052105	Lepisosteus oculatus	37.95	4.00e-115	408.00
IUUC-Lma-052981	Leptosphaeria maculans	41.98	6.00e-50	193.00
IUUC-Mor-056985	Magnaporthe oryzae	41.16	2.00e-54	207.00
IUUC-Mtr-058489	Medicago truncatula	54.13	0.00e+00	842.00
IUUC-Mac-065227	Musa acuminata	52.04	0.00e+00	780.00
IUUC-Obr-076416	Oryza brachyantha	80.71	0.00e+00	1318.00
IUUC-Ogu-078391	Oryza glumaepatula	73.90	0.00e+00	1284.00
IUUC-Oin-079768	Oryza indica	76.92	0.00e+00	1311.00
IUUC-Olo-080319	Oryza longistaminata	76.54	0.00e+00	1233.00
IUUC-Ome-081819	Oryza meridionalis	76.92	0.00e+00	1326.00
IUUC-Oni-082947	Oryza nivara	74.41	0.00e+00	1294.00
IUUC-Opu-083846	Oryza punctata	75.29	0.00e+00	1239.00
IUUC-Oru-084273	Oryza rufipogon	74.41	0.00e+00	1296.00
IUUC-Pop-099333	Populus trichocarpa	61.45	0.00e+00	737.00
IUUC-Ppe-102062	Prunus persica	62.35	0.00e+00	738.00
IUUC-Pte-104102	Pyrenophora teres	44.95	4.00e-47	183.00
IUUC-Pyt-104812	Pyrenophora triticirepentis	44.95	1.00e-47	185.00
IUUC-Sce-106170	Saccharomyces cerevisiae	40.96	1.00e-55	211.00
IUUC-Smo-109356	Selaginella moellendorffii	52.45	1.00e-170	592.00
IUUC-Sit-109930	Setaria italica	85.28	0.00e+00	1457.00
IUUC-Sly-111891	Solanum lycopersicum	50.93	0.00e+00	807.00
IUUC-Tca-121598	Theobroma cacao	54.39	0.00e+00	843.00
IUUC-Tae-125811	Triticum aestivum	73.94	0.00e+00	1276.00
IUUC-Tur-126149	Triticum urartu	77.72	0.00e+00	874.00
IUUC-Vvi-131066	Vitis vinifera	54.38	0.00e+00	882.00
IUUC-Yli-134392	Yarrowia lipolytica	38.64	4.00e-58	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence