iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099341

Ensembl Protein ID

POPTR_0006s05870.1

UniProt Accession

B9N6Y0; B9N6Y0_POPTR

Genbank Protein ID

ERP58858.1

Protein Name

Ubiquitin family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_583635; POPTR_0006s05870g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s05870	POPTR_0006s05870.1	POPTR_0006s05870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	7.40e-21	75.0	22	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           +++++ktl++++++l+v++++ v +lKe+ia+++gv  eqq+LI  Gk+LkDd+ Ls+++++dg+++h+vv+++
   Q: 22   IEIKIKTLDSQTYTLRVDKQMPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYHVEDGHTLHMVVRQP 95
           689********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSNVADKIP KAGEAEGSET NIEIKIKTLD SQTYTLRVDK QMPVPALKEQ IASVTGVLSE 60
QQRLICRGKV LKDDQLLSAY HVEDGHTLHM VVRQPIPQSS EGLSNHPGND PASGSSRHTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGTCAGCC CCAGAATACA TAGAGAGAAA CTAAAACAGA GAGAGAGAGA GAGAGCGCGC 60
ACAGTATCTC TCTCTATCAT TTTTATTCTA ATCTCTCTCT CTCTCCCCAT CTACTTTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

KEGG

pop:POPTR_0006s05870g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000108	Aegilops tauschii	35.81	5.00e-33	135.00
IUUC-Atr-002841	Amborella trichopoda	42.70	2.00e-114	405.00
IUUC-Ath-006772	Arabidopsis thaliana	49.31	8.00e-90	324.00
IUUC-Bdi-015055	Brachypodium distachyon	37.22	1.00e-83	303.00
IUUC-Bol-015630	Brassica oleracea	37.61	9.00e-94	337.00
IUUC-Bra-017052	Brassica rapa	38.78	7.00e-98	350.00
IUUC-Gma-043829	Glycine max	58.36	0.00e+00	654.00
IUUC-Hvu-047698	Hordeum vulgare	41.41	8.00e-81	294.00
IUUC-Lpe-051647	Leersia perrieri	39.34	3.00e-67	248.00
IUUC-Mtr-058678	Medicago truncatula	57.28	0.00e+00	697.00
IUUC-Mac-064984	Musa acuminata	45.49	1.00e-89	323.00
IUUC-Oba-075736	Oryza barthii	41.76	5.00e-87	315.00
IUUC-Obr-076574	Oryza brachyantha	41.46	1.00e-80	293.00
IUUC-Ogl-077678	Oryza glaberrima	41.76	5.00e-87	315.00
IUUC-Ogu-078952	Oryza glumaepatula	42.13	8.00e-87	314.00
IUUC-Ome-081937	Oryza meridionalis	41.56	8.00e-81	294.00
IUUC-Oni-082471	Oryza nivara	42.13	5.00e-87	315.00
IUUC-Opu-083366	Oryza punctata	42.09	1.00e-87	317.00
IUUC-Oru-085170	Oryza rufipogon	42.13	7.00e-87	314.00
IUUC-Ppa-095346	Physcomitrella patens	41.38	6.00e-67	249.00
IUUC-Ppe-101251	Prunus persica	65.49	0.00e+00	827.00
IUUC-Smo-108772	Selaginella moellendorffii	42.14	2.00e-62	233.00
IUUC-Sit-110231	Setaria italica	36.44	1.00e-76	280.00
IUUC-Sly-111426	Solanum lycopersicum	45.16	5.00e-140	491.00
IUUC-Stu-112355	Solanum tuberosum	41.28	4.00e-82	298.00
IUUC-Sbi-114712	Sorghum bicolor	36.99	6.00e-72	265.00
IUUC-Tca-121577	Theobroma cacao	64.22	0.00e+00	822.00
IUUC-Vvi-131042	Vitis vinifera	52.91	3.00e-167	581.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence