iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050893

Ensembl Protein ID

LPERR06G08020.1

UniProt Accession

A0A0D9WNR4; A0A0D9WNR4_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR06G08020	LPERR06G08020.1	LPERR06G08020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-16	61.1	32	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.........tcPvtrqplteedlvPnltlrrliqawcee 71
           +p+eflCpIs++lM dPv++p G+t++r++I+ + a   +         + P  ++pl    l+Pn +lr  i +wc++
   Q: 32   PPAEFLCPISGTLMADPVIVPPGQTFERACIQACAALAFSppavaadlsSLPSASSPL---VLIPNVALRTAILNWCDR 107
           79*********************************88888777766666666666666...78**************86 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MATTWPRWRP SSSTSPPVSS TSSPSSSFTA DPPAEFLCPI SGTLMADPVI VPPGQTFERA 60
CIQACAALAF SPPAVAADLS SLPSASSPLV LIPNVALRTA ILNWCDRLSL PYPTPLSPDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACAA CCTGGCCGCG GTGGCGGCCG TCGTCCTCCA CCTCGCCGCC GGTATCCTCC 60
ACCTCCTCGC CGTCGTCGTC GTTCACGGCG GACCCGCCGG CGGAGTTCCT CTGCCCAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	44.25	2.00e-52	199.00
IUUC-Aly-005903	Arabidopsis lyrata	35.17	2.00e-66	245.00
IUUC-Ath-006703	Arabidopsis thaliana	37.37	8.00e-71	260.00
IUUC-Bdi-014649	Brachypodium distachyon	72.24	2.00e-170	591.00
IUUC-Bol-015923	Brassica oleracea	43.54	1.00e-46	180.00
IUUC-Bra-016715	Brassica rapa	40.40	3.00e-44	172.00
IUUC-Gma-043729	Glycine max	43.54	7.00e-54	204.00
IUUC-Mtr-057660	Medicago truncatula	42.46	1.00e-42	167.00
IUUC-Mac-064560	Musa acuminata	54.91	5.00e-105	374.00
IUUC-Ogl-077033	Oryza glaberrima	79.73	7.00e-160	556.00
IUUC-Ogu-078087	Oryza glumaepatula	82.45	9.00e-122	429.00
IUUC-Oin-079818	Oryza indica	86.92	2.00e-106	378.00
IUUC-Ome-081313	Oryza meridionalis	80.95	2.00e-161	561.00
IUUC-Oni-082747	Oryza nivara	80.30	3.00e-161	561.00
IUUC-Opu-084021	Oryza punctata	80.94	6.00e-168	583.00
IUUC-Oru-084445	Oryza rufipogon	80.99	6.00e-160	557.00
IUUC-Osa-085410	Oryza sativa	80.30	3.00e-161	560.00
IUUC-Pop-099183	Populus trichocarpa	43.25	4.00e-44	171.00
IUUC-Ppe-101245	Prunus persica	41.53	2.00e-57	216.00
IUUC-Sit-109782	Setaria italica	78.37	2.00e-164	571.00
IUUC-Sly-111131	Solanum lycopersicum	40.62	6.00e-78	284.00
IUUC-Stu-112864	Solanum tuberosum	40.56	1.00e-72	266.00
IUUC-Sbi-113814	Sorghum bicolor	75.51	1.00e-146	512.00
IUUC-Tca-121304	Theobroma cacao	36.64	7.00e-72	264.00
IUUC-Tae-124240	Triticum aestivum	73.47	6.00e-174	603.00
IUUC-Vvi-131041	Vitis vinifera	38.29	3.00e-75	275.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence