iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111652

Ensembl Protein ID

Solyc02g069310.2.1

UniProt Accession

Q6GUF2; Q6GUF2_SOLLC

Genbank Protein ID

AAT57638.1

Protein Name

NIM1-like protein 1

Genbank Nucleotide ID

AY640379

Gene Name

NML1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g069310.2	Solyc02g069310.2.1	Solyc02g069310.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	2.20e-12	47.9	67	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 2    DvilvvggeeffahkivLaasSsvFyalf...lmele.esksk.lmveik..d.vqpevfrallkFlYtgkld 66
           D  +vv+g+   +h+++Laa+Ss+F++lf   ++++  e+k++ +m++i   + v +e+f ++l++lY+gkl+
   Q: 67   DAEIVVEGVSLGVHRCILAARSSFFRDLFrkrNGNCGkEGKPSySMIDILpcGkVGYEAFLTFLSYLYSGKLK 139
           8899*************************9999999977763225666665538*****************97 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASSAEPSSS ISFTSTSNTS NGSIGIGQNT CACGGSETGS SYEIISLSKL SNNLEQLLLD 60
SSSEFSDAEI VVEGVSLGVH RCILAARSSF FRDLFRKRNG NCGKEGKPSY SMIDILPCGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGGTTTTT TTGCTCTGCA ATTGGAAATA TTTTTGGTTG TCTTGGCTGG TATGAATGTT 60
ATTCCATTTC GGTAAGTTGT GATCAAGTAG TTGAAGGGTT ATTAGTTGGT AGAATTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR000210--BTB/POZ_dom
IPR021094--NPR1/NIM1-like_C
IPR011333--SKP1/BTB/POZ

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50097--BTB

Pfam

PF12796--Ank_2
PF00651--BTB
PF12313--NPR1_like_C

SMART

SM00248--ANK
SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0042742--P:defense response to bacterium
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:2000022--P:regulation of jasmonic acid mediated signaling pathway
GO:0030162--P:regulation of proteolysis

KEGG

sly:543940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001052	Aegilops tauschii	47.06	2.00e-120	425.00
IUUC-Atr-003091	Amborella trichopoda	56.62	3.00e-171	594.00
IUUC-Aly-005495	Arabidopsis lyrata	56.73	7.00e-156	543.00
IUUC-Ath-006582	Arabidopsis thaliana	58.10	8.00e-162	562.00
IUUC-Bdi-014820	Brachypodium distachyon	55.81	2.00e-148	518.00
IUUC-Bol-016168	Brassica oleracea	57.52	5.00e-167	580.00
IUUC-Bra-017463	Brassica rapa	56.79	7.00e-168	583.00
IUUC-Cho-024977	Choloepus hoffmanni	37.33	3.00e-06	45.80
IUUC-Gac-041350	Gasterosteus aculeatus	32.29	8.00e-07	47.80
IUUC-Gma-042735	Glycine max	70.60	0.00e+00	744.00
IUUC-Hvu-047716	Hordeum vulgare	47.50	6.00e-124	437.00
IUUC-Lpe-051281	Leersia perrieri	57.01	1.00e-148	519.00
IUUC-Mcc-055004	Macaca mulatta	36.49	9.00e-07	47.80
IUUC-Mtr-058654	Medicago truncatula	69.30	0.00e+00	735.00
IUUC-Mac-065548	Musa acuminata	63.52	1.00e-178	618.00
IUUC-Ont-071927	Oreochromis niloticus	35.14	1.00e-06	47.40
IUUC-Oba-075074	Oryza barthii	54.15	4.00e-144	504.00
IUUC-Obr-076350	Oryza brachyantha	60.61	3.00e-134	470.00
IUUC-Ogl-077930	Oryza glaberrima	55.73	2.00e-151	528.00
IUUC-Ogu-078387	Oryza glumaepatula	55.33	6.00e-154	536.00
IUUC-Oin-079463	Oryza indica	55.89	3.00e-150	524.00
IUUC-Olo-080981	Oryza longistaminata	59.60	2.00e-126	444.00
IUUC-Ome-081437	Oryza meridionalis	57.06	4.00e-159	553.00
IUUC-Oni-082237	Oryza nivara	55.33	6.00e-154	536.00
IUUC-Opu-083712	Oryza punctata	53.89	9.00e-147	513.00
IUUC-Oru-084496	Oryza rufipogon	55.62	2.00e-151	528.00
IUUC-Osa-086262	Oryza sativa	55.62	2.00e-151	528.00
IUUC-Ppa-095278	Physcomitrella patens	37.09	9.00e-78	283.00
IUUC-Pop-099287	Populus trichocarpa	70.76	0.00e+00	754.00
IUUC-Ppe-101336	Prunus persica	70.58	0.00e+00	727.00
IUUC-Sit-109849	Setaria italica	52.95	9.00e-152	529.00
IUUC-Stu-112546	Solanum tuberosum	94.93	0.00e+00	1014.00
IUUC-Sar-113636	Sorex araneus	41.89	2.00e-06	46.20
IUUC-Sbi-113993	Sorghum bicolor	57.43	2.00e-157	548.00
IUUC-Tca-121013	Theobroma cacao	69.68	0.00e+00	746.00
IUUC-Tae-125381	Triticum aestivum	54.65	4.00e-156	543.00
IUUC-Vvi-130962	Vitis vinifera	72.66	0.00e+00	759.00
IUUC-Yli-134612	Yarrowia lipolytica	29.85	4.20e-02	31.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence