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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-106123
Ensembl Protein ID ENSRNOP00000009566.5
UniProt Accession G3V6W2; G3V6W2_RAT
Genbank Protein ID EDM02956.1
Protein Name Prolactin regulatory element-binding protein; RCG62389, isoform CRA_a
Genbank Nucleotide ID AC120639
Gene Name Preb; rCG_62389
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000007141.6 ENSRNOT00000009565.6 ENSRNOP00000009566.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFACRAID2
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.10e-08 32.9 160 185
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 9    laf.sd.tllvsGsdDgtikvWDlrt 32
           ++f +d tll++G+ Dg ++vW + +
   Q: 160  VCFnHDnTLLATGGTDGHVRVWKVPS 185
           5688566***************9865 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MGRRRGVELY RAPFPLYALR IDPKTGLLIA AGGGGAAKTG IKNGVHFLQL EQISGCLSAS 60
LLHSHDTETR ATMNLALAGD ILAAGQDAQC QLLRFQIHQQ KGSKAEKSGS KEQGPRQRKG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-106123|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGCGCGAGCG CAGATCGGCT ACCTGCGGTG ATTAGAGTGG TGGCAAATCC ACAGTGCTGA 60
GAGGGGTCGC CAGTCTTCCG GGAAACTGTA GCACCAAGTT CCGCAGCTTT TGGAGGCGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-106123|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat
Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0032527--P:protein exit from endoplasmic reticulum
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000155 Aegilops tauschii 22.35 3.00e-09 56.20
IUUC-Aml-001671 Ailuropoda melanoleuca 88.33 0.00e+00 653.00
IUUC-Atr-002477 Amborella trichopoda 24.39 1.00e-11 64.30
IUUC-Aly-005479 Arabidopsis lyrata 28.10 4.00e-14 72.40
IUUC-Ath-006922 Arabidopsis thaliana 26.89 7.00e-15 75.10
IUUC-Ame-010812 Astyanax mexicanus 50.19 2.00e-60 225.00
IUUC-Bta-012386 Bos taurus 90.67 0.00e+00 709.00
IUUC-Bdi-014110 Brachypodium distachyon 25.87 4.00e-19 89.00
IUUC-Bra-017708 Brassica rapa 30.04 2.00e-18 86.30
IUUC-Cel-018480 Caenorhabditis elegans 22.91 8.00e-19 88.20
IUUC-Cja-018998 Callithrix jacchus 87.89 0.00e+00 714.00
IUUC-Cfa-020666 Canis familiaris 88.52 0.00e+00 682.00
IUUC-Cpo-022030 Cavia porcellus 79.76 2.00e-179 621.00
IUUC-Csa-023521 Chlorocebus sabaeus 89.47 0.00e+00 676.00
IUUC-Cin-025431 Ciona intestinalis 32.35 1.00e-45 177.00
IUUC-Dre-027832 Danio rerio 54.59 2.00e-127 448.00
IUUC-Dno-028989 Dasypus novemcinctus 87.56 0.00e+00 721.00
IUUC-Dme-031901 Drosophila melanogaster 31.72 2.00e-49 189.00
IUUC-Ete-032290 Echinops telfairi 87.56 0.00e+00 665.00
IUUC-Eca-033917 Equus caballus 89.95 0.00e+00 705.00
IUUC-Fca-036323 Felis catus 89.23 0.00e+00 702.00
IUUC-Gmo-038693 Gadus morhua 54.73 2.00e-125 442.00
IUUC-Gga-040702 Gallus gallus 66.10 7.00e-142 496.00
IUUC-Gac-042635 Gasterosteus aculeatus 53.78 6.00e-114 404.00
IUUC-Gma-043946 Glycine max 27.35 7.00e-18 85.10
IUUC-Ggo-044648 Gorilla gorilla 89.42 0.00e+00 651.00
IUUC-Hsa-046003 Homo sapiens 89.69 0.00e+00 681.00
IUUC-Itr-048613 Ictidomys tridecemlineatus 88.49 0.00e+00 687.00
IUUC-Lch-049473 Latimeria chalumnae 59.43 2.00e-138 485.00
IUUC-Lpe-051586 Leersia perrieri 24.80 1.00e-18 87.40
IUUC-Loc-052177 Lepisosteus oculatus 59.95 1.00e-137 483.00
IUUC-Laf-054366 Loxodonta africana 88.28 0.00e+00 686.00
IUUC-Mcc-055775 Macaca mulatta 89.26 0.00e+00 673.00
IUUC-Meu-056562 Macropus eugenii 76.32 2.00e-157 548.00
IUUC-Mtr-058661 Medicago truncatula 26.04 1.00e-19 90.50
IUUC-Mvi-060443 Microbotryum violaceum 24.88 8.00e-11 62.00
IUUC-Mmr-061126 Microcebus murinus 89.23 0.00e+00 657.00
IUUC-Mdo-062928 Monodelphis domestica 76.67 1.00e-159 556.00
IUUC-Mmu-064083 Mus musculus 96.88 0.00e+00 709.00
IUUC-Mac-064955 Musa acuminata 28.06 6.00e-17 82.00
IUUC-Mpu-066857 Mustela putorius furo 87.32 0.00e+00 716.00
IUUC-Mlu-067891 Myotis lucifugus 89.47 0.00e+00 681.00
IUUC-Nle-070030 Nomascus leucogenys 87.29 0.00e+00 651.00
IUUC-Opr-070864 Ochotona princeps 89.55 6.00e-130 457.00
IUUC-Ont-072204 Oreochromis niloticus 57.21 2.00e-124 438.00
IUUC-Oan-073643 Ornithorhynchus anatinus 68.35 9.00e-114 402.00
IUUC-Ocu-074217 Oryctolagus cuniculus 86.36 0.00e+00 635.00
IUUC-Oba-075587 Oryza barthii 26.55 4.00e-18 85.50
IUUC-Obr-076826 Oryza brachyantha 24.08 2.00e-19 89.70
IUUC-Ogl-077927 Oryza glaberrima 24.91 1.00e-18 87.40
IUUC-Ogu-078241 Oryza glumaepatula 24.91 2.00e-18 86.70
IUUC-Oin-080217 Oryza indica 24.91 2.00e-18 87.00
IUUC-Olo-081060 Oryza longistaminata 24.91 1.00e-18 87.80
IUUC-Ome-082007 Oryza meridionalis 24.91 8.00e-19 87.80
IUUC-Oni-082827 Oryza nivara 24.91 2.00e-18 87.00
IUUC-Opu-083159 Oryza punctata 24.91 5.00e-18 85.50
IUUC-Oru-085039 Oryza rufipogon 24.91 2.00e-18 87.00
IUUC-Osa-086258 Oryza sativa 24.91 2.00e-18 87.00
IUUC-Ola-087223 Oryzias latipes 58.04 5.00e-119 421.00
IUUC-Oga-088417 Otolemur garnettii 85.89 0.00e+00 636.00
IUUC-Oar-090435 Ovis aries 90.67 0.00e+00 709.00
IUUC-Ptr-090869 Pan troglodytes 89.45 0.00e+00 653.00
IUUC-Pan-092527 Papio anubis 89.47 0.00e+00 676.00
IUUC-Pma-094156 Petromyzon marinus 52.90 2.00e-111 395.00
IUUC-Ppa-095904 Physcomitrella patens 27.17 9.00e-13 67.80
IUUC-Pfo-097488 Poecilia formosa 52.34 9.00e-119 420.00
IUUC-Pab-097720 Pongo abelii 89.69 0.00e+00 679.00
IUUC-Pop-099618 Populus trichocarpa 27.63 9.00e-20 91.30
IUUC-Pca-100288 Procavia capensis 76.85 4.00e-166 577.00
IUUC-Ppe-101864 Prunus persica 27.60 6.00e-13 68.60
IUUC-Pva-103192 Pteropus vampyrus 89.23 0.00e+00 691.00
IUUC-Sha-107169 Sarcophilus harrisii 78.10 6.00e-163 566.00
IUUC-Smo-109265 Selaginella moellendorffii 28.34 6.00e-15 75.10
IUUC-Sly-111551 Solanum lycopersicum 28.57 2.00e-14 73.20
IUUC-Stu-112264 Solanum tuberosum 28.57 3.00e-13 69.30
IUUC-Sar-113218 Sorex araneus 85.07 1.00e-109 388.00
IUUC-Ssc-115282 Sus scrofa 88.19 0.00e+00 664.00
IUUC-Tru-117866 Takifugu rubripes 54.88 5.00e-119 421.00
IUUC-Tca-121083 Theobroma cacao 27.63 1.00e-17 84.00
IUUC-Tae-124218 Triticum aestivum 26.25 1.00e-17 83.60
IUUC-Tur-126597 Triticum urartu 22.02 9.00e-08 50.80
IUUC-Ttr-128585 Tursiops truncatus 87.08 0.00e+00 640.00
IUUC-Vvi-131024 Vitis vinifera 28.35 7.00e-20 91.70
IUUC-Xma-134081 Xiphophorus maculatus 52.35 1.00e-116 413.00
Created Date 25-Jun-2017

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