iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__1110__AT5G52250.1	fgenesh2_kg.8__1110__AT5G52250.1	fgenesh2_kg.8__1110__AT5G52250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-22	77.0	167	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf...sdtll.vsGsdDgtikvWDlrtgvl 35
           +++++++   ++ l+ +sGsdDgt+++WD+r g  
   Q: 167  RIWSVDYtlyNGSLIgASGSDDGTVQMWDPRNGGT 201
           5999999987657889*************999876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEALFCSEIP NNNIRSSIND LSSSSYTWPM IMTSSSTSSS SPTIMNIENI PRCDWDLSLS 60
AVVSSASTGS DAIGAIEFDP TGEIIATGGI ARKIRSYRLS SLLESRDDHV TASDSCIYTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGTTTCTT GTGGACCTAA CAAAAACTAG TCGTAACTCA TTCATGGAGG CTTTGTTCTG 60
CTCTGAGATA CCCAACAACA ACATCAGATC TTCCATTAAC GATCTCTCTT CTTCTTCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043496--P:regulation of protein homodimerization activity
GO:0010218--P:response to far red light
GO:0010114--P:response to red light
GO:0010224--P:response to UV-B

KEGG

aly:ARALYDRAFT_495294

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006872	Arabidopsis thaliana	96.62	0.00e+00	644.00
IUUC-Bol-015816	Brassica oleracea	82.18	2.00e-146	511.00
IUUC-Bra-016672	Brassica rapa	82.65	4.00e-153	533.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	35.25	9.00e-43	166.00
IUUC-Opu-083787	Oryza punctata	44.79	4.00e-73	267.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence