iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058229

Ensembl Protein ID

AES98075

UniProt Accession

G7KB94; G7KB94_MEDTR

Genbank Protein ID

AES98075.1

Protein Name

F-box/RNI/FBD-like domain protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g063950

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g063950	AES98075	AES98075

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	50.00	2.40e+00	28.10	IUUC-Sce-106324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSSSSTNMM NVLPDDILKH ILSLLSTRDA FRTKFVCKSW VPLSELLDVL ILLSRHIQHI 60
PLKTLYLFCH YKVRRPCFRL NQCVEAAKRR GIEDLSINWP RGVSSPSIFY CKTLVVLRLQ 120

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Nucleotide Sequence
(Fasta)

ATGTCGTCGT CATCGTCAAC AAACATGATG AACGTGTTAC CAGATGATAT ACTGAAACAC 60
ATACTCTCTC TACTCTCAAC CAGAGATGCT TTCAGAACAA AGTTTGTTTG CAAGTCGTGG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR006566--FBD
IPR032675--L_dom-like

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF08387--FBD

SMART

SM00579--FBD
SM00256--FBOX

KEGG

mtr:MTR_5g063950

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000840	Aegilops tauschii	22.40	2.00e-05	43.10
IUUC-Aly-006243	Arabidopsis lyrata	27.59	1.50e-02	33.50
IUUC-Ath-006752	Arabidopsis thaliana	23.94	7.00e-06	44.70
IUUC-Bdi-014513	Brachypodium distachyon	38.24	2.00e-02	32.70
IUUC-Bol-015210	Brassica oleracea	23.00	1.00e-08	54.70
IUUC-Hvu-047066	Hordeum vulgare	22.01	3.30e-02	32.30
IUUC-Lpe-051609	Leersia perrieri	39.39	2.30e-02	35.00
IUUC-Oba-075244	Oryza barthii	20.73	1.00e-06	49.30
IUUC-Obr-076082	Oryza brachyantha	53.12	5.00e-03	35.00
IUUC-Ogl-077037	Oryza glaberrima	43.75	7.00e-03	34.70
IUUC-Ogu-078756	Oryza glumaepatula	20.73	1.00e-06	49.70
IUUC-Oin-079412	Oryza indica	43.75	7.00e-03	34.70
IUUC-Oni-082319	Oryza nivara	23.32	2.00e-07	51.60
IUUC-Oru-085052	Oryza rufipogon	44.44	2.00e-03	38.50
IUUC-Sce-106324	Saccharomyces cerevisiae	50.00	9.80e-02	28.10
IUUC-Sit-110045	Setaria italica	39.39	3.30e-02	32.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence