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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018254
UUCD1 version UUC-CaE-00455
Ensembl Protein ID Y54E10A.11
UniProt Accession Q65XX2; LTN1_CAEEL
Genbank Protein ID CCD72830.1
Protein Name E3 ubiquitin-protein ligase listerin; RING-type E3 ubiquitin transferase listerin
Genbank Nucleotide ID FO081614
Gene Name Y54E10A.11
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00021831 Y54E10A.11 Y54E10A.11
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 41.43 3.00e-43 175.00 IUUC-Hsa-047016
E3 activity/RING/RING 41.90 7.00e-44 177.00 IUUC-Mmu-064389
E3 activity/RING/RING 31.36 9.00e-28 121.00 IUUC-Sce-106305
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     E3 ubiquitin-protein ligase. Component of the ribosome quality control complex (RQC), a ribosome-associated complex that mediates ubiquitination and extraction of incompletely synthesized nascent chains for proteasomal degradation. Ubiquitination leads to vcp/p97 recruitment for extraction and degradation of the incomplete translation product.
 E3 ubiquitin-protein ligase. Component of the ribosome quality control complex (RQC), a ribosome-associated complex that mediates ubiquitination and extraction of incompletely synthesized nascent chains for proteasomal degradation. Ubiquitination leads to vcp/p97 recruitment for extraction and degradation of the incomplete translation product.
Protein Sequence
(Fasta)
MSKQQRRKGN AKNASSAAAH EYLAQGGATF VGLTPEMNIF EVASSNRLHQ VVEIDDETRI 60
VMKKLTKKDC QTREKGLKEL MELINTENSS IESSYEHFCG LVAQLTTDGS PTVRMLTMKV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018254|E3,RING|Caenorhabditis elegans
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Nucleotide Sequence
(Fasta)
CTGCAATTTA CCATCTAAAA AGCTCACAGA GACACACTAC ACTCCACCTT TAAAAGCAAA 60
CGCGCTCCAC CGAACAACTC CCAATTTTTT CCATTTTTAT TAGGAAATAC TGGATAATAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018254|E3,RING|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016740--F:transferase activity
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination
KEGG cel:CELE_Y54E10A.11
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000717 Aegilops tauschii 37.90 4.00e-40 159.00
IUUC-Aml-002311 Ailuropoda melanoleuca 41.43 3.00e-45 176.00
IUUC-Atr-002905 Amborella trichopoda 38.46 6.00e-37 149.00
IUUC-Apl-003323 Anas platyrhynchos 44.27 2.00e-41 164.00
IUUC-Aca-004616 Anolis carolinensis 39.33 1.00e-47 184.00
IUUC-Aly-006145 Arabidopsis lyrata 38.86 1.00e-36 148.00
IUUC-Ath-006844 Arabidopsis thaliana 39.38 4.00e-38 153.00
IUUC-Ago-007750 Ashbya gossypii 32.94 2.00e-27 117.00
IUUC-Acl-008369 Aspergillus clavatus 40.00 3.00e-32 133.00
IUUC-Afl-008540 Aspergillus flavus 40.23 2.00e-31 130.00
IUUC-Afu-009089 Aspergillus fumigatus 40.23 4.00e-32 132.00
IUUC-Ani-009292 Aspergillus nidulans 39.44 2.00e-28 120.00
IUUC-Ang-009715 Aspergillus niger 34.68 2.00e-24 107.00
IUUC-Aor-009887 Aspergillus oryzae 40.23 1.00e-31 130.00
IUUC-Ate-010308 Aspergillus terreus 32.24 5.00e-16 79.70
IUUC-Ame-011345 Astyanax mexicanus 42.23 9.00e-45 175.00
IUUC-Bta-012535 Bos taurus 41.86 1.00e-42 168.00
IUUC-Bci-013630 Botrytis cinerea 35.88 4.00e-25 110.00
IUUC-Bdi-014142 Brachypodium distachyon 36.99 7.00e-38 152.00
IUUC-Bol-015333 Brassica oleracea 38.86 2.00e-36 147.00
IUUC-Bra-017739 Brassica rapa 41.18 4.00e-08 49.70
IUUC-Cja-019469 Callithrix jacchus 41.43 2.00e-45 177.00
IUUC-Cfa-020640 Canis familiaris 41.23 8.00e-44 172.00
IUUC-Cpo-021322 Cavia porcellus 41.86 4.00e-46 179.00
IUUC-Cre-022677 Chlamydomonas reinhardtii 40.17 5.00e-26 112.00
IUUC-Csa-024234 Chlorocebus sabaeus 41.43 3.00e-45 176.00
IUUC-Cho-024709 Choloepus hoffmanni 44.67 3.00e-44 173.00
IUUC-Csv-026100 Ciona savignyi 39.00 4.00e-42 166.00
IUUC-Cgl-026598 Colletotrichum gloeosporioides 47.95 7.00e-21 90.10
IUUC-Cne-026789 Cryptococcus neoformans 30.88 1.00e-28 121.00
IUUC-Cme-027135 Cyanidioschyzon merolae 33.78 6.00e-14 73.20
IUUC-Dre-027405 Danio rerio 43.41 1.00e-46 181.00
IUUC-Dno-029874 Dasypus novemcinctus 38.96 1.00e-25 111.00
IUUC-Dor-030589 Dipodomys ordii 45.18 1.00e-42 167.00
IUUC-Dse-031427 Dothistroma septosporum 32.38 9.00e-31 128.00
IUUC-Dme-031827 Drosophila melanogaster 39.51 2.00e-35 144.00
IUUC-Ete-032459 Echinops telfairi 44.67 9.00e-46 178.00
IUUC-Eca-033218 Equus caballus 41.43 3.00e-45 176.00
IUUC-Eeu-035299 Erinaceus europaeus 78.95 2.00e-04 40.80
IUUC-Fca-036081 Felis catus 41.43 3.00e-45 176.00
IUUC-Fal-037561 Ficedula albicollis 44.27 2.00e-41 164.00
IUUC-Fox-037930 Fusarium oxysporum 35.26 1.00e-29 125.00
IUUC-Fso-038413 Fusarium solani 34.10 5.00e-28 119.00
IUUC-Gmo-039359 Gadus morhua 40.78 6.00e-43 169.00
IUUC-Ggr-039744 Gaeumannomyces graminis 33.57 4.00e-23 103.00
IUUC-Gga-041175 Gallus gallus 43.75 2.00e-41 164.00
IUUC-Gac-041943 Gasterosteus aculeatus 40.49 4.00e-43 169.00
IUUC-Gma-043888 Glycine max 38.46 5.00e-39 156.00
IUUC-Ggo-044912 Gorilla gorilla 24.41 4.00e-10 59.70
IUUC-Hsa-047016 Homo sapiens 41.43 8.00e-45 175.00
IUUC-Hvu-047059 Hordeum vulgare 37.44 9.00e-39 155.00
IUUC-Itr-048789 Ictidomys tridecemlineatus 44.67 2.00e-45 176.00
IUUC-Kpa-049133 Komagataella pastoris 34.38 1.00e-30 127.00
IUUC-Lch-049879 Latimeria chalumnae 34.95 2.00e-30 127.00
IUUC-Lpe-051455 Leersia perrieri 38.24 2.00e-37 150.00
IUUC-Loc-052799 Lepisosteus oculatus 43.63 1.00e-47 184.00
IUUC-Lma-052972 Leptosphaeria maculans 36.49 5.00e-28 119.00
IUUC-Laf-053479 Loxodonta africana 44.67 2.00e-45 177.00
IUUC-Mcc-055120 Macaca mulatta 41.43 3.00e-45 176.00
IUUC-Meu-055932 Macropus eugenii 44.79 1.00e-44 174.00
IUUC-Mor-057209 Magnaporthe oryzae 31.07 1.00e-27 118.00
IUUC-Mpo-057581 Magnaporthe poae 31.82 1.00e-19 91.70
IUUC-Mtr-058499 Medicago truncatula 37.95 1.00e-38 155.00
IUUC-Mla-059169 Melampsora laricipopulina 37.04 2.00e-26 110.00
IUUC-Mga-059800 Meleagris gallopavo 43.75 2.00e-41 163.00
IUUC-Mvi-060350 Microbotryum violaceum 33.04 1.00e-35 145.00
IUUC-Mmr-061548 Microcebus murinus 41.43 3.00e-45 176.00
IUUC-Mdo-062405 Monodelphis domestica 44.79 7.00e-45 175.00
IUUC-Mmu-064389 Mus musculus 41.90 2.00e-45 177.00
IUUC-Mac-064596 Musa acuminata 41.67 4.00e-39 156.00
IUUC-Mpu-065687 Mustela putorius furo 41.31 2.00e-45 177.00
IUUC-Mlu-067591 Myotis lucifugus 41.51 1.00e-44 174.00
IUUC-Nfi-068298 Neosartorya fischeri 40.23 5.00e-32 132.00
IUUC-Ncr-068876 Neurospora crassa 30.24 5.00e-26 112.00
IUUC-Nle-069799 Nomascus leucogenys 41.43 2.00e-45 177.00
IUUC-Opr-071155 Ochotona princeps 40.67 1.00e-44 174.00
IUUC-Ont-071290 Oreochromis niloticus 40.39 7.00e-44 172.00
IUUC-Ocu-074947 Oryctolagus cuniculus 26.80 2.00e-46 180.00
IUUC-Oba-075986 Oryza barthii 37.75 2.00e-37 150.00
IUUC-Obr-076304 Oryza brachyantha 38.24 3.00e-38 153.00
IUUC-Ogl-077600 Oryza glaberrima 37.75 2.00e-37 150.00
IUUC-Ogu-078079 Oryza glumaepatula 37.75 2.00e-37 150.00
IUUC-Oin-079935 Oryza indica 37.75 3.00e-37 150.00
IUUC-Olo-080897 Oryza longistaminata 37.75 2.00e-37 150.00
IUUC-Ome-081777 Oryza meridionalis 37.75 2.00e-37 150.00
IUUC-Oni-082298 Oryza nivara 37.75 2.00e-37 150.00
IUUC-Opu-083156 Oryza punctata 37.75 2.00e-37 151.00
IUUC-Oru-085243 Oryza rufipogon 37.75 2.00e-37 150.00
IUUC-Osa-086219 Oryza sativa 37.75 3.00e-37 150.00
IUUC-Ola-087202 Oryzias latipes 40.98 3.00e-44 173.00
IUUC-Olu-087800 Ostreococcus lucimarinus 34.51 1.00e-38 155.00
IUUC-Oga-088962 Otolemur garnettii 41.43 2.00e-45 177.00
IUUC-Oar-089858 Ovis aries 41.86 4.00e-46 179.00
IUUC-Ptr-090958 Pan troglodytes 38.03 3.00e-45 177.00
IUUC-Pan-092712 Papio anubis 41.43 3.00e-45 177.00
IUUC-Psi-093557 Pelodiscus sinensis 44.67 1.00e-45 178.00
IUUC-Pma-094199 Petromyzon marinus 34.23 2.00e-18 83.20
IUUC-Pno-094947 Phaeosphaeria nodorum 39.29 2.00e-27 117.00
IUUC-Ppa-095258 Physcomitrella patens 37.95 4.00e-38 153.00
IUUC-Pfo-097035 Poecilia formosa 40.98 7.00e-45 175.00
IUUC-Pab-097897 Pongo abelii 38.03 3.00e-45 176.00
IUUC-Pop-099487 Populus trichocarpa 35.45 1.00e-39 158.00
IUUC-Pca-100688 Procavia capensis 49.29 4.00e-35 143.00
IUUC-Ppe-101821 Prunus persica 33.18 2.00e-37 150.00
IUUC-Pva-102632 Pteropus vampyrus 36.80 4.00e-45 176.00
IUUC-Pgr-103311 Puccinia graminis 33.18 1.00e-33 138.00
IUUC-Ptt-103825 Puccinia triticina 30.93 1.00e-25 111.00
IUUC-Pte-104036 Pyrenophora teres 35.14 7.00e-25 108.00
IUUC-Pyt-104460 Pyrenophora triticirepentis 29.86 5.00e-25 109.00
IUUC-Rno-104852 Rattus norvegicus 40.95 8.00e-45 175.00
IUUC-Sce-106305 Saccharomyces cerevisiae 31.36 1.00e-28 121.00
IUUC-Sja-107896 Schizosaccharomyces japonicus 32.86 5.00e-32 132.00
IUUC-Spo-108267 Schizosaccharomyces pombe 30.50 9.00e-29 122.00
IUUC-Ssl-108449 Sclerotinia sclerotiorum 37.29 8.00e-06 43.10
IUUC-Smo-109180 Selaginella moellendorffii 33.68 1.00e-30 128.00
IUUC-Sit-110615 Setaria italica 35.56 9.00e-36 145.00
IUUC-Sly-111861 Solanum lycopersicum 37.12 1.00e-40 161.00
IUUC-Stu-112373 Solanum tuberosum 37.12 1.00e-40 160.00
IUUC-Sar-113666 Sorex araneus 41.40 6.00e-46 179.00
IUUC-Sbi-114597 Sorghum bicolor 38.36 8.00e-39 155.00
IUUC-Sre-114965 Sporisorium reilianum 29.02 6.00e-31 129.00
IUUC-Ssc-115866 Sus scrofa 41.40 6.00e-46 179.00
IUUC-Tgu-117521 Taeniopygia guttata 38.46 1.00e-41 164.00
IUUC-Tru-117803 Takifugu rubripes 40.49 2.00e-44 174.00
IUUC-Tsy-119135 Tarsius syrichta 39.71 2.00e-40 160.00
IUUC-Tni-119807 Tetraodon nigroviridis 40.49 1.00e-42 167.00
IUUC-Tca-121036 Theobroma cacao 35.45 4.00e-39 156.00
IUUC-Tre-121942 Trichoderma reesei 33.53 7.00e-28 119.00
IUUC-Tvi-122453 Trichoderma virens 31.79 5.00e-26 112.00
IUUC-Tae-123061 Triticum aestivum 37.90 3.00e-40 160.00
IUUC-Tur-126021 Triticum urartu 37.90 1.00e-39 158.00
IUUC-Tme-126889 Tuber melanosporum 26.92 3.00e-24 107.00
IUUC-Tbe-127297 Tupaia belangeri 37.62 6.00e-30 125.00
IUUC-Ttr-128745 Tursiops truncatus 41.40 7.00e-46 179.00
IUUC-Uma-129552 Ustilago maydis 29.46 7.00e-32 132.00
IUUC-Vda-129838 Verticillium dahliae 33.17 8.00e-30 125.00
IUUC-Vpa-130567 Vicugna pacos 41.40 8.00e-46 178.00
IUUC-Vvi-131418 Vitis vinifera 37.73 1.00e-43 171.00
IUUC-Xtr-132926 Xenopus tropicalis 46.73 1.00e-43 171.00
IUUC-Xma-134278 Xiphophorus maculatus 40.98 9.00e-45 175.00
IUUC-Yli-134476 Yarrowia lipolytica 38.57 4.00e-39 156.00
IUUC-Zma-135611 Zea mays 38.36 1.00e-38 155.00
Created Date 25-Jun-2017

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