iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__1797__AT5G58580.1	fgenesh2_kg.8__1797__AT5G58580.1	fgenesh2_kg.8__1797__AT5G58580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-07	30.2	141	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl   + g    ++ +CgH fh +C+ +w       s + +CPlCr
   Q: 141  CVICLGLWEAGdfgRKLRNCGHGFHVECIDMW------LSSHSTCPLCR 183
           999*886644422123446*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSEEEDGSMS VKSSLSSFLK ILSSYNSNVL LAALVFLLLV VLFVLLLHFY ARFFWSPSHQ 60
DFSAAGRNRR RRRRNRRRTV TTTRIIPSLS LGGFDGGVNA PATATTAATN DDKGLDSSVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGAAG AAGAAGACGG CTCAATGAGT GTTAAAAGCA GTCTCTCAAG CTTCCTCAAG 60
ATCTTATCTT CTTACAACTC CAATGTCCTT TTAGCTGCTC TAGTCTTCCT TCTCTTAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005769--C:early endosome
GO:0005798--C:Golgi-associated vesicle
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding
GO:0071470--P:cellular response to osmotic stress
GO:0030100--P:regulation of endocytosis
GO:1903426--P:regulation of reactive oxygen species biosynthetic process
GO:1901000--P:regulation of response to salt stress

KEGG

aly:ARALYDRAFT_495981

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000525	Aegilops tauschii	40.24	3.00e-13	65.90
IUUC-Ath-007163	Arabidopsis thaliana	79.55	2.00e-73	268.00
IUUC-Bol-016350	Brassica oleracea	74.25	2.00e-53	202.00
IUUC-Bra-016698	Brassica rapa	73.36	1.00e-63	236.00
IUUC-Gma-043667	Glycine max	63.29	9.00e-22	96.70
IUUC-Mtr-058692	Medicago truncatula	57.47	1.00e-22	99.40
IUUC-Ogl-077261	Oryza glaberrima	45.45	7.00e-16	75.90
IUUC-Oru-084506	Oryza rufipogon	45.45	7.00e-16	75.90
IUUC-Osa-085289	Oryza sativa	45.45	7.00e-16	75.90
IUUC-Pop-099382	Populus trichocarpa	45.83	2.00e-23	101.00
IUUC-Sly-111499	Solanum lycopersicum	63.16	2.00e-21	94.40
IUUC-Stu-112903	Solanum tuberosum	64.00	2.00e-21	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence