iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014039

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100824720; BRADI_3g38870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G38870	BRADI3G38870.1	BRADI3G38870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.90e-06	26.6	207	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++     ++ ++ lpC H +h++C+  w         + +CPlCr
   Q: 207  CAVCKDGVaagEC-VKRLPCSHRYHEECIVPW------LEVRNSCPLCR 248
           ******9977444.999***************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MASSYLLLRL AADEIFRTLE PSSSSTSSSS CYDAFVPVFR PDPSAASPAS AAAADRVRSQ 60
FLSVEPDLFH DALVAPRNDR LGFPEVDDEE EEASIRWDCF QFDDEESDLP LEAAAPADEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCCT CGTACCTCCT CCTGCGGCTC GCCGCCGACG AGATCTTCCG GACCCTAGAG 60
CCCTCCTCTT CCTCCACGTC GTCCTCTTCA TGCTACGACG CCTTCGTGCC GGTGTTCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

bdi:100824720

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000783	Aegilops tauschii	76.96	9.00e-87	312.00
IUUC-Ath-007318	Arabidopsis thaliana	41.78	5.00e-24	104.00
IUUC-Gma-043673	Glycine max	46.38	8.00e-25	107.00
IUUC-Hvu-047121	Hordeum vulgare	75.00	1.00e-94	338.00
IUUC-Lpe-051131	Leersia perrieri	70.14	2.00e-71	261.00
IUUC-Mac-064954	Musa acuminata	44.62	5.00e-32	131.00
IUUC-Oba-075271	Oryza barthii	68.21	1.00e-74	271.00
IUUC-Obr-076279	Oryza brachyantha	66.79	2.00e-70	258.00
IUUC-Ogl-077383	Oryza glaberrima	68.21	1.00e-74	271.00
IUUC-Ogu-078274	Oryza glumaepatula	69.42	7.00e-79	286.00
IUUC-Oin-079119	Oryza indica	67.86	5.00e-74	270.00
IUUC-Ome-081587	Oryza meridionalis	67.79	1.00e-67	248.00
IUUC-Oni-082032	Oryza nivara	69.06	2.00e-77	281.00
IUUC-Opu-083819	Oryza punctata	69.03	7.00e-75	272.00
IUUC-Oru-084467	Oryza rufipogon	67.86	3.00e-74	270.00
IUUC-Osa-085411	Oryza sativa	67.86	5.00e-74	270.00
IUUC-Sit-110546	Setaria italica	66.05	6.00e-56	209.00
IUUC-Sbi-113878	Sorghum bicolor	58.16	5.00e-57	213.00
IUUC-Tae-123498	Triticum aestivum	75.37	2.00e-95	341.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence