iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112202

Ensembl Protein ID

PGSC0003DMT400062863

UniProt Accession

M1C9N6; M1C9N6_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400024471	PGSC0003DMT400062863	PGSC0003DMT400062863

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.80e-15	56.1	39	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+e++CpI + lM dPvv+++G++++r+s++ + +   k    ++   + ++++Pnl+lr +i  wce+++
   Q: 39   PPKELICPIYGCLMFDPVVVSTGQSFERTSVQVCKDLEFKPQLQNGLNPDFTNVIPNLALRTTILTWCEKSG 110
           79*********************************9999999999999999******************986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MYSPFRKANG ETGRHGRSKS VWNIFVYRPS SSKFDKRDPP KELICPIYGC LMFDPVVVST 60
GQSFERTSVQ VCKDLEFKPQ LQNGLNPDFT NVIPNLALRT TILTWCEKSG AEKPQQPDYY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAGCTGTC AATGTTAGAC CAAATCTTAA GTGGTAACTT AAGTAAATAG CCAAAGAAGC 60
AAGCCCTTCA AACTAAAATC ATAGAATACC AAACCATTCT TTGAGACTCA GTTTGTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102582496

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005887	Arabidopsis lyrata	50.67	6.00e-129	452.00
IUUC-Ath-007165	Arabidopsis thaliana	51.31	3.00e-128	450.00
IUUC-Bol-015998	Brassica oleracea	49.90	1.00e-110	392.00
IUUC-Bra-017987	Brassica rapa	49.05	2.00e-113	401.00
IUUC-Gma-043462	Glycine max	53.37	3.00e-139	487.00
IUUC-Mtr-057660	Medicago truncatula	55.89	4.00e-128	450.00
IUUC-Pop-099467	Populus trichocarpa	55.16	9.00e-143	499.00
IUUC-Ppe-101245	Prunus persica	55.07	4.00e-137	480.00
IUUC-Sly-111894	Solanum lycopersicum	91.23	0.00e+00	757.00
IUUC-Tca-121713	Theobroma cacao	55.98	1.00e-134	471.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence