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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105967
UUCD1 version UUC-RaN-00846
Ensembl Protein ID ENSRNOP00000047839.3
UniProt Accession Q5PPN1; Q5PPN1_RAT
Genbank Protein ID AAH87595.1
Protein Name Ring finger protein 113A; Ring finger protein 113A1
Genbank Nucleotide ID AABR07041254
Gene Name Rnf113a1; LOC108348079; Rnf113a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000034040.5 ENSRNOT00000051474.5 ENSRNOP00000047839.3
Annotation
mRNA Expression
ArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
CPLMdbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 87.72 4.00e-167 585.00 IUUC-Hsa-047000
E3 activity/RING/RING 41.54 2.00e-48 189.00 IUUC-Osa-086166
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAEQLSPGNS TGKVCTFLFK KPGRKGTAGR RKRPLCDEGS GDSGSSSDEG SAVVRPEKKQ 60
ATHNPMIQKT RGSAKQKTNY GGLSSEDENE PEGLGVTYKS TRSAKPVGPE DMGATAVYEL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105967|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGACGACCG GAAGCGGTCC CGTAGGTCAC AGCAGTTTCA GAACTTGGGG ATCTCTAATG 60
GCGGAGCAAC TTTCTCCAGG GAATTCTACC GGTAAGGTGT GCACTTTTCT CTTCAAAAAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105967|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00642--zf-CCCH
SMART

SM00184--RING
SM00356--ZnF_C3H1
Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing
KEGG rno:108348079; rno:313450
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000118 Aegilops tauschii 41.57 1.00e-50 194.00
IUUC-Aml-002002 Ailuropoda melanoleuca 83.05 2.00e-157 548.00
IUUC-Atr-003145 Amborella trichopoda 42.80 3.00e-52 198.00
IUUC-Apl-003440 Anas platyrhynchos 84.36 5.00e-125 439.00
IUUC-Aca-004421 Anolis carolinensis 80.33 2.00e-138 484.00
IUUC-Aly-006121 Arabidopsis lyrata 38.91 2.00e-53 202.00
IUUC-Ath-007493 Arabidopsis thaliana 45.02 6.00e-54 204.00
IUUC-Ago-007731 Ashbya gossypii 45.38 1.00e-29 122.00
IUUC-Acl-008186 Aspergillus clavatus 42.71 4.00e-42 165.00
IUUC-Afl-008484 Aspergillus flavus 37.44 4.00e-39 155.00
IUUC-Afu-008971 Aspergillus fumigatus 42.71 4.00e-42 165.00
IUUC-Ani-009499 Aspergillus nidulans 44.94 6.00e-41 160.00
IUUC-Ang-009717 Aspergillus niger 38.52 2.00e-42 166.00
IUUC-Aor-009898 Aspergillus oryzae 37.44 4.00e-39 155.00
IUUC-Ate-010508 Aspergillus terreus 41.67 1.00e-39 157.00
IUUC-Ame-011925 Astyanax mexicanus 74.01 3.00e-124 437.00
IUUC-Bgr-012259 Blumeria graminis 42.93 2.00e-41 163.00
IUUC-Bta-012490 Bos taurus 87.72 8.00e-169 585.00
IUUC-Bci-013882 Botrytis cinerea 41.21 1.00e-39 156.00
IUUC-Bdi-014084 Brachypodium distachyon 41.02 3.00e-50 192.00
IUUC-Bol-016607 Brassica oleracea 44.21 4.00e-53 202.00
IUUC-Bra-017747 Brassica rapa 37.28 1.00e-54 206.00
IUUC-Cel-018698 Caenorhabditis elegans 47.15 6.00e-68 251.00
IUUC-Cja-019434 Callithrix jacchus 86.40 2.00e-149 521.00
IUUC-Cfa-020902 Canis familiaris 85.88 8.00e-160 556.00
IUUC-Cre-022885 Chlamydomonas reinhardtii 36.76 2.00e-41 162.00
IUUC-Csa-023933 Chlorocebus sabaeus 66.47 5.00e-120 424.00
IUUC-Cho-024587 Choloepus hoffmanni 86.47 8.00e-132 462.00
IUUC-Cin-025328 Ciona intestinalis 68.88 1.00e-104 372.00
IUUC-Csv-026148 Ciona savignyi 70.17 2.00e-104 372.00
IUUC-Cgl-026700 Colletotrichum gloeosporioides 40.88 4.00e-33 135.00
IUUC-Cne-026816 Cryptococcus neoformans 37.36 2.00e-41 162.00
IUUC-Dre-027744 Danio rerio 70.31 1.00e-125 442.00
IUUC-Dse-031155 Dothistroma septosporum 47.55 5.00e-37 148.00
IUUC-Dme-031788 Drosophila melanogaster 61.25 1.00e-97 349.00
IUUC-Ete-033013 Echinops telfairi 87.77 3.00e-143 501.00
IUUC-Eca-033460 Equus caballus 88.05 4.00e-160 557.00
IUUC-Fca-035525 Felis catus 87.13 8.00e-165 572.00
IUUC-Fal-037206 Ficedula albicollis 83.65 9.00e-134 469.00
IUUC-Fox-037959 Fusarium oxysporum 35.96 4.00e-36 145.00
IUUC-Fso-038348 Fusarium solani 31.51 2.00e-39 156.00
IUUC-Gmo-038718 Gadus morhua 68.45 1.00e-119 422.00
IUUC-Ggr-040114 Gaeumannomyces graminis 40.09 3.00e-41 162.00
IUUC-Gga-041037 Gallus gallus 76.07 7.00e-137 479.00
IUUC-Gac-042103 Gasterosteus aculeatus 70.03 1.00e-122 432.00
IUUC-Gma-043581 Glycine max 45.85 5.00e-56 211.00
IUUC-Ggo-044906 Gorilla gorilla 87.72 3.00e-158 551.00
IUUC-Hsa-047000 Homo sapiens 87.72 3.00e-158 551.00
IUUC-Hvu-047578 Hordeum vulgare 44.64 1.00e-23 100.00
IUUC-Itr-048102 Ictidomys tridecemlineatus 86.30 3.00e-165 574.00
IUUC-Kpa-049320 Komagataella pastoris 40.00 2.00e-34 138.00
IUUC-Lch-050488 Latimeria chalumnae 71.88 2.00e-137 481.00
IUUC-Lpe-051156 Leersia perrieri 41.70 1.00e-46 179.00
IUUC-Loc-052670 Lepisosteus oculatus 78.15 2.00e-131 461.00
IUUC-Lma-053326 Leptosphaeria maculans 41.38 4.00e-37 149.00
IUUC-Laf-053570 Loxodonta africana 87.58 1.00e-169 588.00
IUUC-Mcc-055375 Macaca mulatta 89.06 9.00e-154 536.00
IUUC-Meu-056191 Macropus eugenii 76.05 1.00e-138 485.00
IUUC-Mor-057193 Magnaporthe oryzae 39.29 2.00e-37 149.00
IUUC-Mpo-057603 Magnaporthe poae 35.14 1.00e-39 156.00
IUUC-Mtr-058182 Medicago truncatula 48.23 7.00e-56 211.00
IUUC-Mla-058921 Melampsora laricipopulina 40.83 3.00e-34 137.00
IUUC-Mga-059281 Meleagris gallopavo 83.77 2.00e-134 471.00
IUUC-Mvi-060317 Microbotryum violaceum 42.39 6.00e-38 151.00
IUUC-Mmr-061744 Microcebus murinus 87.50 2.00e-159 554.00
IUUC-Mmu-064400 Mus musculus 95.31 1.00e-177 615.00
IUUC-Mac-065265 Musa acuminata 42.86 3.00e-47 182.00
IUUC-Mpu-066867 Mustela putorius furo 84.39 5.00e-157 546.00
IUUC-Mlu-067828 Myotis lucifugus 83.86 8.00e-156 542.00
IUUC-Nfi-068575 Neosartorya fischeri 40.62 3.00e-38 152.00
IUUC-Ncr-068828 Neurospora crassa 41.40 1.00e-38 154.00
IUUC-Nle-069137 Nomascus leucogenys 87.13 4.00e-157 547.00
IUUC-Ont-071497 Oreochromis niloticus 67.99 1.00e-126 446.00
IUUC-Oan-073182 Ornithorhynchus anatinus 80.51 8.00e-135 473.00
IUUC-Ocu-073949 Oryctolagus cuniculus 86.88 3.00e-160 557.00
IUUC-Oba-075693 Oryza barthii 40.77 2.00e-46 179.00
IUUC-Obr-076128 Oryza brachyantha 41.27 6.00e-46 177.00
IUUC-Ogl-077323 Oryza glaberrima 40.77 2.00e-46 179.00
IUUC-Ogu-078766 Oryza glumaepatula 40.77 2.00e-46 179.00
IUUC-Oin-080054 Oryza indica 40.77 2.00e-46 179.00
IUUC-Olo-080325 Oryza longistaminata 42.20 3.00e-38 152.00
IUUC-Ome-081331 Oryza meridionalis 38.85 8.00e-47 180.00
IUUC-Oni-082786 Oryza nivara 40.77 3.00e-46 179.00
IUUC-Opu-083855 Oryza punctata 42.21 2.00e-46 179.00
IUUC-Oru-084304 Oryza rufipogon 40.77 2.00e-46 179.00
IUUC-Osa-086166 Oryza sativa 40.77 2.00e-46 179.00
IUUC-Ola-086368 Oryzias latipes 63.72 1.00e-120 426.00
IUUC-Olu-087624 Ostreococcus lucimarinus 42.73 4.00e-46 177.00
IUUC-Oga-088080 Otolemur garnettii 86.88 9.00e-164 569.00
IUUC-Oar-089934 Ovis aries 89.06 8.00e-165 572.00
IUUC-Ptr-090827 Pan troglodytes 87.72 2.00e-158 551.00
IUUC-Pan-092245 Papio anubis 89.06 9.00e-154 536.00
IUUC-Psi-093790 Pelodiscus sinensis 85.13 2.00e-141 494.00
IUUC-Pma-094326 Petromyzon marinus 69.93 1.00e-121 428.00
IUUC-Pno-095057 Phaeosphaeria nodorum 42.68 3.00e-36 145.00
IUUC-Ppa-095690 Physcomitrella patens 43.80 2.00e-54 206.00
IUUC-Pfo-097026 Poecilia formosa 72.28 4.00e-126 444.00
IUUC-Pab-098689 Pongo abelii 87.13 2.00e-157 548.00
IUUC-Pca-100687 Procavia capensis 86.18 8.00e-146 509.00
IUUC-Ppe-101155 Prunus persica 45.63 4.00e-55 207.00
IUUC-Pgr-103440 Puccinia graminis 40.53 8.00e-43 167.00
IUUC-Ptt-103893 Puccinia triticina 32.03 1.00e-30 127.00
IUUC-Pte-104377 Pyrenophora teres 45.27 4.00e-38 151.00
IUUC-Pyt-104731 Pyrenophora triticirepentis 45.27 9.00e-38 150.00
IUUC-Sce-106215 Saccharomyces cerevisiae 42.86 2.00e-36 145.00
IUUC-Sha-107587 Sarcophilus harrisii 72.93 2.00e-133 468.00
IUUC-Sja-107955 Schizosaccharomyces japonicus 40.84 3.00e-38 153.00
IUUC-Spo-108336 Schizosaccharomyces pombe 37.16 4.00e-33 135.00
IUUC-Smo-109109 Selaginella moellendorffii 41.46 8.00e-51 194.00
IUUC-Sit-110234 Setaria italica 39.85 3.00e-48 185.00
IUUC-Sly-111790 Solanum lycopersicum 52.32 4.00e-44 170.00
IUUC-Stu-111994 Solanum tuberosum 40.76 2.00e-57 216.00
IUUC-Sar-113374 Sorex araneus 85.38 4.00e-154 537.00
IUUC-Sbi-114766 Sorghum bicolor 42.04 9.00e-51 193.00
IUUC-Sre-115021 Sporisorium reilianum 36.52 2.00e-49 189.00
IUUC-Ssc-115474 Sus scrofa 88.63 2.00e-160 558.00
IUUC-Tgu-116649 Taeniopygia guttata 78.83 6.00e-142 496.00
IUUC-Tru-117701 Takifugu rubripes 69.26 1.00e-120 426.00
IUUC-Tni-120607 Tetraodon nigroviridis 68.95 9.00e-119 419.00
IUUC-Tca-121278 Theobroma cacao 45.24 3.00e-44 172.00
IUUC-Tre-122006 Trichoderma reesei 32.86 3.00e-32 132.00
IUUC-Tvi-122670 Trichoderma virens 38.25 1.00e-36 146.00
IUUC-Tae-122716 Triticum aestivum 41.57 1.00e-50 192.00
IUUC-Tur-126208 Triticum urartu 42.63 4.00e-50 191.00
IUUC-Tme-126908 Tuber melanosporum 42.07 3.00e-37 148.00
IUUC-Tbe-127394 Tupaia belangeri 87.46 3.00e-159 554.00
IUUC-Uma-129339 Ustilago maydis 36.61 4.00e-50 191.00
IUUC-Vda-129895 Verticillium dahliae 34.85 1.00e-39 156.00
IUUC-Vpa-130519 Vicugna pacos 85.46 4.00e-144 503.00
IUUC-Vvi-131382 Vitis vinifera 46.02 7.00e-51 194.00
IUUC-Xtr-131923 Xenopus tropicalis 71.03 2.00e-133 468.00
IUUC-Xma-133705 Xiphophorus maculatus 72.08 8.00e-128 449.00
IUUC-Yli-134518 Yarrowia lipolytica 49.29 5.00e-35 140.00
IUUC-Zma-135029 Zea mays 45.54 2.00e-44 172.00
Created Date 25-Jun-2017

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