iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018555

Ensembl Protein ID

F32A5.6

UniProt Accession

Q19951; PEX13_CAEEL

Genbank Protein ID

CCD66278.1

Protein Name

Probable peroxisomal membrane protein PEX13; Peroxin-13

Genbank Nucleotide ID

FO080735

Gene Name

prx-13; F32A5.6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00004198	F32A5.6	F32A5.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	2.60e-11	43.6	237	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 3    kekvqvlydyeaqnddeLtlkkGdvvlvi..ekeeqdegWlkgvkelegkrGlfPenFvekl 62
           +++ q+l+d++a+n+ eL++ +G++++v   e++    gWl +   +  + Gl+P n+v+ +
   Q: 237  HYTAQALFDFQASNEQELSFMNGETLRVApkEEQPRVRGWLLASVADGSRIGLVPINYVRIV 298
           6889*************************665566678*****88888899********865 PP

Organism

Caenorhabditis elegans

Functional Description
(View)

Component of the peroxisomal translocation machinery with PEX14 and PEX17. Functions as a docking factor for the predominantly cytoplasmic PTS1 receptor (PAS10/PEX5) (By similarity).

Protein Sequence
(Fasta)

MSAPPTNQPP PLPPRSFDNQ MSNPMINTGF GYGGGYGMNT FPGSGMYGGG GMYGGGMGYG 60
GFGGGFNHMG YGQGPDSNFA RLAEEQSRGA FQSIESVVNA VSSVANMLNS THNAVYSSFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTATAATG TCCGCACCTC CAACAAATCA ACCACCTCCG CTGCCGCCAA GGTCATTTGA 60
TGTAATTATT GATAAATTGT TTTGAAACTC CTACTAATCG ATAATATTTA AGAATCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0576--Peroxisome
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0728--SH3 domain
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0813--Transport

Interpro

IPR007223--Peroxin-13_N
IPR001452--SH3_domain

PROSITE

PS50002--SH3

Pfam

PF04088--Peroxin-13_N
PF14604--SH3_9

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005778--C:peroxisomal membrane
GO:0002119--P:nematode larval development
GO:0016560--P:protein import into peroxisome matrix, docking

KEGG

cel:CELE_F32A5.6

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008309	Aspergillus clavatus	35.00	1.00e-05	43.10
IUUC-Afl-008685	Aspergillus flavus	37.10	4.00e-05	40.00
IUUC-Afu-008858	Aspergillus fumigatus	37.10	4.00e-05	41.60
IUUC-Ani-009346	Aspergillus nidulans	38.71	2.00e-05	42.40
IUUC-Ang-009589	Aspergillus niger	37.10	4.00e-05	41.20
IUUC-Aor-009976	Aspergillus oryzae	37.10	5.00e-05	41.60
IUUC-Ate-010396	Aspergillus terreus	37.10	5.00e-05	40.80
IUUC-Bgr-012179	Blumeria graminis	40.32	2.00e-06	46.20
IUUC-Bci-013764	Botrytis cinerea	40.32	3.00e-06	45.40
IUUC-Cgl-026608	Colletotrichum gloeosporioides	40.32	2.00e-06	45.40
IUUC-Dse-031484	Dothistroma septosporum	36.84	4.00e-06	40.80
IUUC-Fox-037916	Fusarium oxysporum	40.32	3.00e-06	45.40
IUUC-Fso-038233	Fusarium solani	40.32	2.00e-06	45.80
IUUC-Kpa-049154	Komagataella pastoris	27.19	2.00e-15	75.50
IUUC-Lch-049491	Latimeria chalumnae	42.92	2.00e-44	171.00
IUUC-Lma-053062	Leptosphaeria maculans	38.71	6.00e-06	44.70
IUUC-Meu-056585	Macropus eugenii	36.59	1.00e-05	43.50
IUUC-Mvi-060271	Microbotryum violaceum	27.88	8.00e-18	83.60
IUUC-Nfi-068582	Neosartorya fischeri	37.10	4.00e-05	41.60
IUUC-Oba-075752	Oryza barthii	34.43	5.00e-03	37.00
IUUC-Pno-094868	Phaeosphaeria nodorum	38.71	6.00e-06	44.30
IUUC-Pte-104168	Pyrenophora teres	38.71	7.00e-06	43.90
IUUC-Pyt-104443	Pyrenophora triticirepentis	38.71	7.00e-06	43.90
IUUC-Sce-106346	Saccharomyces cerevisiae	37.29	5.00e-06	43.10
IUUC-Ssl-108447	Sclerotinia sclerotiorum	40.32	3.00e-06	45.40
IUUC-Tni-120225	Tetraodon nigroviridis	42.04	8.00e-43	166.00
IUUC-Tre-122250	Trichoderma reesei	40.32	2.00e-06	45.40
IUUC-Tvi-122478	Trichoderma virens	40.32	2.00e-06	45.40
IUUC-Vda-129961	Verticillium dahliae	40.32	2.00e-06	45.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence