iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118386

Ensembl Protein ID

ENSTRUP00000000308.1

UniProt Accession

H2RJJ5; H2RJJ5_TAKRU

Protein Name

Uncharacterized protein

Gene Name

upf1 (1 of many); LOC101064659

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000000150.1	ENSTRUT00000000311.1	ENSTRUP00000000308.1
ENSTRUG00000000150.1	ENSTRUT00000000312.1	ENSTRUP00000000309.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	56.16	0.00e+00	942.00	IUUC-Sce-106206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MSVEAYGPSS QTLTFLDIEE TELLGADTQG SEYDFTDFTL PSQTQTQGQS QLENQVNGPD 60
IVLQNGEDAV VKASQLLAEL NFEEDEEDAY YTKDLPAHAC SYCGIHDPAC VVYCNTSKKW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTATTATGG GATACAGTGG GAGCTCTATA TAGGGTATAG CGATCCGCAA TTAGCGGACA 60
CCCTTTGGGC TATTATTCAT TGGGGCTTAC TCTGTTATAA GGGCTGTTTT GATATCACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct

Pfam

PF04851--ResIII
PF09416--UPF1_Zn_bind

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0008270--F:zinc ion binding
GO:0043009--P:chordate embryonic development
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000680	Aegilops tauschii	70.25	0.00e+00	1158.00
IUUC-Aml-002008	Ailuropoda melanoleuca	88.39	0.00e+00	1970.00
IUUC-Atr-002632	Amborella trichopoda	67.66	0.00e+00	1250.00
IUUC-Apl-003997	Anas platyrhynchos	90.86	0.00e+00	1905.00
IUUC-Aca-004322	Anolis carolinensis	31.76	3.00e-54	206.00
IUUC-Aly-006521	Arabidopsis lyrata	70.43	0.00e+00	1231.00
IUUC-Ath-007059	Arabidopsis thaliana	70.19	0.00e+00	1232.00
IUUC-Ago-007801	Ashbya gossypii	54.31	0.00e+00	942.00
IUUC-Acl-008312	Aspergillus clavatus	63.07	0.00e+00	1182.00
IUUC-Afl-008429	Aspergillus flavus	66.91	0.00e+00	1177.00
IUUC-Afu-009092	Aspergillus fumigatus	63.05	0.00e+00	1178.00
IUUC-Ani-009317	Aspergillus nidulans	67.89	0.00e+00	1180.00
IUUC-Ang-009783	Aspergillus niger	66.79	0.00e+00	1172.00
IUUC-Aor-010178	Aspergillus oryzae	66.91	0.00e+00	1177.00
IUUC-Ate-010294	Aspergillus terreus	66.39	0.00e+00	1177.00
IUUC-Ame-010774	Astyanax mexicanus	87.71	0.00e+00	811.00
IUUC-Bgr-012293	Blumeria graminis	66.14	0.00e+00	1169.00
IUUC-Bta-012382	Bos taurus	88.50	0.00e+00	1974.00
IUUC-Bci-013937	Botrytis cinerea	66.63	0.00e+00	1166.00
IUUC-Bdi-014612	Brachypodium distachyon	71.78	0.00e+00	1245.00
IUUC-Bol-015145	Brassica oleracea	69.39	0.00e+00	1222.00
IUUC-Bra-017370	Brassica rapa	67.97	0.00e+00	1187.00
IUUC-Cel-018240	Caenorhabditis elegans	54.07	0.00e+00	982.00
IUUC-Cja-019892	Callithrix jacchus	89.89	0.00e+00	1892.00
IUUC-Cfa-020700	Canis familiaris	88.27	0.00e+00	1972.00
IUUC-Cpo-021510	Cavia porcellus	88.09	0.00e+00	1974.00
IUUC-Cre-022731	Chlamydomonas reinhardtii	58.60	0.00e+00	980.00
IUUC-Csa-023665	Chlorocebus sabaeus	87.92	0.00e+00	1956.00
IUUC-Cin-025798	Ciona intestinalis	78.42	0.00e+00	1361.00
IUUC-Csv-025901	Ciona savignyi	70.56	0.00e+00	1577.00
IUUC-Cgl-026653	Colletotrichum gloeosporioides	63.91	0.00e+00	1141.00
IUUC-Cne-027014	Cryptococcus neoformans	62.74	0.00e+00	1186.00
IUUC-Dre-028705	Danio rerio	90.76	0.00e+00	2021.00
IUUC-Dor-030369	Dipodomys ordii	87.50	0.00e+00	1811.00
IUUC-Dme-031767	Drosophila melanogaster	71.26	0.00e+00	1388.00
IUUC-Ete-032800	Echinops telfairi	33.88	1.00e-53	204.00
IUUC-Eca-033840	Equus caballus	90.13	0.00e+00	1896.00
IUUC-Fca-035466	Felis catus	90.16	0.00e+00	1899.00
IUUC-Fal-037548	Ficedula albicollis	90.24	0.00e+00	1873.00
IUUC-Fox-038023	Fusarium oxysporum	63.48	0.00e+00	1140.00
IUUC-Gmo-039285	Gadus morhua	90.09	0.00e+00	1955.00
IUUC-Ggr-039810	Gaeumannomyces graminis	65.38	0.00e+00	1162.00
IUUC-Gga-040972	Gallus gallus	88.57	0.00e+00	1961.00
IUUC-Gac-042075	Gasterosteus aculeatus	89.92	0.00e+00	1974.00
IUUC-Gma-042713	Glycine max	71.38	0.00e+00	1278.00
IUUC-Ggo-045398	Gorilla gorilla	90.11	0.00e+00	1892.00
IUUC-Hsa-046152	Homo sapiens	87.92	0.00e+00	1956.00
IUUC-Hvu-047555	Hordeum vulgare	71.05	0.00e+00	717.00
IUUC-Itr-048247	Ictidomys tridecemlineatus	91.03	0.00e+00	1864.00
IUUC-Kpa-049205	Komagataella pastoris	49.39	0.00e+00	764.00
IUUC-Lch-049587	Latimeria chalumnae	89.90	0.00e+00	1233.00
IUUC-Lpe-051059	Leersia perrieri	71.99	0.00e+00	1251.00
IUUC-Loc-051911	Lepisosteus oculatus	90.69	0.00e+00	1964.00
IUUC-Lma-053007	Leptosphaeria maculans	65.25	0.00e+00	1147.00
IUUC-Laf-054234	Loxodonta africana	88.16	0.00e+00	1959.00
IUUC-Mcc-054762	Macaca mulatta	88.57	0.00e+00	1969.00
IUUC-Meu-056677	Macropus eugenii	84.06	0.00e+00	813.00
IUUC-Mor-057147	Magnaporthe oryzae	65.89	0.00e+00	1155.00
IUUC-Mpo-057314	Magnaporthe poae	65.38	0.00e+00	1162.00
IUUC-Mtr-058329	Medicago truncatula	71.26	0.00e+00	1277.00
IUUC-Mla-059094	Melampsora laricipopulina	63.23	0.00e+00	676.00
IUUC-Mga-060126	Meleagris gallopavo	90.37	0.00e+00	1880.00
IUUC-Mvi-060373	Microbotryum violaceum	66.23	0.00e+00	1258.00
IUUC-Mmr-060628	Microcebus murinus	88.66	0.00e+00	1971.00
IUUC-Mdo-061858	Monodelphis domestica	90.76	0.00e+00	1904.00
IUUC-Mmu-064116	Mus musculus	87.96	0.00e+00	1952.00
IUUC-Mac-065136	Musa acuminata	70.55	0.00e+00	1243.00
IUUC-Mpu-066463	Mustela putorius furo	88.01	0.00e+00	1961.00
IUUC-Mlu-068098	Myotis lucifugus	87.88	0.00e+00	1952.00
IUUC-Nfi-068370	Neosartorya fischeri	67.23	0.00e+00	1177.00
IUUC-Ncr-068792	Neurospora crassa	64.39	0.00e+00	1155.00
IUUC-Nle-070102	Nomascus leucogenys	90.02	0.00e+00	1884.00
IUUC-Opr-070620	Ochotona princeps	83.27	0.00e+00	1725.00
IUUC-Ont-072685	Oreochromis niloticus	89.89	0.00e+00	1945.00
IUUC-Oan-073665	Ornithorhynchus anatinus	88.40	0.00e+00	1971.00
IUUC-Ocu-074154	Oryctolagus cuniculus	33.26	3.00e-55	210.00
IUUC-Oba-075075	Oryza barthii	68.11	0.00e+00	996.00
IUUC-Obr-076183	Oryza brachyantha	71.89	0.00e+00	1070.00
IUUC-Ogl-077691	Oryza glaberrima	72.74	0.00e+00	1248.00
IUUC-Ogu-078423	Oryza glumaepatula	72.74	0.00e+00	1248.00
IUUC-Oin-080107	Oryza indica	72.74	0.00e+00	1248.00
IUUC-Olo-080269	Oryza longistaminata	72.40	0.00e+00	1175.00
IUUC-Ome-081779	Oryza meridionalis	72.74	0.00e+00	1246.00
IUUC-Oni-082366	Oryza nivara	72.74	0.00e+00	1248.00
IUUC-Opu-083958	Oryza punctata	72.51	0.00e+00	1252.00
IUUC-Oru-084182	Oryza rufipogon	72.74	0.00e+00	1248.00
IUUC-Osa-085285	Oryza sativa	72.51	0.00e+00	1249.00
IUUC-Ola-086954	Oryzias latipes	87.67	0.00e+00	1931.00
IUUC-Olu-087685	Ostreococcus lucimarinus	56.70	0.00e+00	933.00
IUUC-Oga-088591	Otolemur garnettii	88.01	0.00e+00	1957.00
IUUC-Oar-089417	Ovis aries	87.26	0.00e+00	1840.00
IUUC-Ptr-091510	Pan troglodytes	91.39	0.00e+00	1772.00
IUUC-Pan-091886	Papio anubis	87.92	0.00e+00	1956.00
IUUC-Psi-093755	Pelodiscus sinensis	89.64	0.00e+00	1346.00
IUUC-Pma-094470	Petromyzon marinus	88.71	0.00e+00	1795.00
IUUC-Pno-094963	Phaeosphaeria nodorum	61.20	0.00e+00	1153.00
IUUC-Ppa-095479	Physcomitrella patens	71.50	0.00e+00	1276.00
IUUC-Pfo-097456	Poecilia formosa	89.82	0.00e+00	1944.00
IUUC-Pab-098075	Pongo abelii	82.80	0.00e+00	1785.00
IUUC-Pop-099557	Populus trichocarpa	70.43	0.00e+00	1261.00
IUUC-Pca-100717	Procavia capensis	98.99	6.00e-175	608.00
IUUC-Ppe-101675	Prunus persica	71.26	0.00e+00	1276.00
IUUC-Pva-103029	Pteropus vampyrus	90.68	0.00e+00	1310.00
IUUC-Pgr-103318	Puccinia graminis	64.74	0.00e+00	1200.00
IUUC-Ptt-103956	Puccinia triticina	65.32	0.00e+00	1201.00
IUUC-Pte-104399	Pyrenophora teres	61.29	0.00e+00	1155.00
IUUC-Pyt-104749	Pyrenophora triticirepentis	61.07	0.00e+00	1153.00
IUUC-Rno-105784	Rattus norvegicus	88.13	0.00e+00	1959.00
IUUC-Sce-106206	Saccharomyces cerevisiae	56.16	0.00e+00	926.00
IUUC-Sha-106566	Sarcophilus harrisii	90.85	0.00e+00	1907.00
IUUC-Sja-107721	Schizosaccharomyces japonicus	62.20	0.00e+00	1086.00
IUUC-Spo-108258	Schizosaccharomyces pombe	58.54	0.00e+00	1044.00
IUUC-Ssl-108640	Sclerotinia sclerotiorum	63.27	0.00e+00	1029.00
IUUC-Smo-109676	Selaginella moellendorffii	22.33	1.00e+00	28.90
IUUC-Sit-109760	Setaria italica	72.00	0.00e+00	1241.00
IUUC-Sly-111807	Solanum lycopersicum	71.65	0.00e+00	1277.00
IUUC-Stu-112869	Solanum tuberosum	70.94	0.00e+00	1264.00
IUUC-Sar-112950	Sorex araneus	33.33	3.00e-43	170.00
IUUC-Sbi-114863	Sorghum bicolor	72.37	0.00e+00	1246.00
IUUC-Sre-115092	Sporisorium reilianum	66.22	0.00e+00	1253.00
IUUC-Tgu-117214	Taeniopygia guttata	86.52	0.00e+00	1599.00
IUUC-Tsy-119550	Tarsius syrichta	92.88	2.00e-161	563.00
IUUC-Tni-120212	Tetraodon nigroviridis	88.84	0.00e+00	1897.00
IUUC-Tca-121353	Theobroma cacao	70.93	0.00e+00	1270.00
IUUC-Tre-122245	Trichoderma reesei	34.94	2.00e-52	201.00
IUUC-Tvi-122452	Trichoderma virens	63.67	0.00e+00	1104.00
IUUC-Tae-123692	Triticum aestivum	72.00	0.00e+00	1242.00
IUUC-Tur-126770	Triticum urartu	60.36	0.00e+00	1058.00
IUUC-Tme-126956	Tuber melanosporum	67.71	0.00e+00	1187.00
IUUC-Tbe-127873	Tupaia belangeri	34.83	4.00e-49	189.00
IUUC-Ttr-128212	Tursiops truncatus	84.58	0.00e+00	1839.00
IUUC-Uma-129327	Ustilago maydis	65.55	0.00e+00	1245.00
IUUC-Vda-129858	Verticillium dahliae	64.64	0.00e+00	1120.00
IUUC-Vpa-130743	Vicugna pacos	33.65	2.00e-51	197.00
IUUC-Vvi-131222	Vitis vinifera	71.38	0.00e+00	1254.00
IUUC-Xtr-131800	Xenopus tropicalis	76.65	0.00e+00	1622.00
IUUC-Xma-133216	Xiphophorus maculatus	89.91	0.00e+00	1946.00
IUUC-Yli-134482	Yarrowia lipolytica	53.48	0.00e+00	891.00
IUUC-Zma-134802	Zea mays	71.29	0.00e+00	1253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence