iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027111

Ensembl Protein ID

CMI132CT

UniProt Accession

M1VGX4; M1VGX4_CYAM1

Genbank Protein ID

BAM80018.1

Protein Name

U3 snoRNP component Sof1p

Genbank Nucleotide ID

AP006491

Gene Name

CYME_CMI132C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMI132C	CMI132CT	CMI132CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-24	82.1	294	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH ++v +++f ++ + l++Gs+D+t++++D r+
   Q: 294  GHVGPVLSICFaPTgHELCTGSYDNTVRIFDCRE 327
           8***********88799**************876 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MRVYCLTRSE RELKETAVAR TIRNLDPQLH PFERAREYKR ALNSAKIERA LARPLVAAYE 60
GHADGIYAMS VHPIRMAEVA TASGDGEVRI WRLSQRSAGS GESLVQSRLG HAAPVCGLTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGTGTTT ACTGTCTGAC ACGTTCCGAG CGTGAACTCA AAGAGACGGC GGTGGCTCGC 60
ACGATCCGGA ACTTGGATCC TCAACTGCAT CCCTTTGAGC GCGCAAGGGA GTACAAGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex

KEGG

cme:CYME_CMI132C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	33.79	1.00e-73	268.00
IUUC-Atr-002799	Amborella trichopoda	34.95	4.00e-76	276.00
IUUC-Apl-003675	Anas platyrhynchos	34.50	1.00e-73	267.00
IUUC-Aca-004792	Anolis carolinensis	35.54	3.00e-77	279.00
IUUC-Aly-005998	Arabidopsis lyrata	34.62	2.00e-76	276.00
IUUC-Ath-007526	Arabidopsis thaliana	34.84	1.00e-74	271.00
IUUC-Ago-007774	Ashbya gossypii	34.00	2.00e-73	267.00
IUUC-Acl-008024	Aspergillus clavatus	36.09	2.00e-73	267.00
IUUC-Afu-008930	Aspergillus fumigatus	35.02	1.00e-70	258.00
IUUC-Ani-009370	Aspergillus nidulans	35.55	3.00e-73	266.00
IUUC-Ang-009827	Aspergillus niger	35.55	3.00e-73	266.00
IUUC-Aor-010060	Aspergillus oryzae	35.62	4.00e-71	259.00
IUUC-Ate-010434	Aspergillus terreus	33.16	2.00e-58	216.00
IUUC-Ame-011967	Astyanax mexicanus	36.08	2.00e-73	267.00
IUUC-Bgr-011989	Blumeria graminis	34.17	4.00e-72	262.00
IUUC-Bta-013291	Bos taurus	26.35	2.00e-35	140.00
IUUC-Bci-013868	Botrytis cinerea	34.41	9.00e-74	268.00
IUUC-Bdi-014343	Brachypodium distachyon	33.64	9.00e-74	268.00
IUUC-Bol-015740	Brassica oleracea	33.56	8.00e-73	265.00
IUUC-Bra-016689	Brassica rapa	33.49	2.00e-72	263.00
IUUC-Cel-018536	Caenorhabditis elegans	32.32	1.00e-64	237.00
IUUC-Cja-018779	Callithrix jacchus	34.71	3.00e-76	276.00
IUUC-Cfa-020105	Canis familiaris	34.48	1.00e-75	274.00
IUUC-Cpo-021538	Cavia porcellus	34.19	1.00e-73	267.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	44.36	7.00e-29	117.00
IUUC-Csa-023492	Chlorocebus sabaeus	35.24	9.00e-77	278.00
IUUC-Cho-024497	Choloepus hoffmanni	30.59	2.00e-37	147.00
IUUC-Cin-025524	Ciona intestinalis	32.95	5.00e-68	249.00
IUUC-Csv-026197	Ciona savignyi	33.64	2.00e-70	257.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	34.94	7.00e-74	268.00
IUUC-Cne-026840	Cryptococcus neoformans	40.86	3.00e-49	188.00
IUUC-Dre-027471	Danio rerio	35.40	4.00e-74	269.00
IUUC-Dno-029790	Dasypus novemcinctus	35.05	1.00e-63	234.00
IUUC-Dor-030971	Dipodomys ordii	27.46	6.00e-44	169.00
IUUC-Dse-031563	Dothistroma septosporum	36.53	3.00e-73	266.00
IUUC-Dme-032161	Drosophila melanogaster	33.11	8.00e-70	254.00
IUUC-Ete-033127	Echinops telfairi	32.35	3.00e-64	237.00
IUUC-Eca-033531	Equus caballus	34.47	9.00e-73	265.00
IUUC-Eeu-034663	Erinaceus europaeus	33.07	8.00e-43	166.00
IUUC-Fca-036258	Felis catus	34.48	1.00e-75	274.00
IUUC-Fal-037456	Ficedula albicollis	34.66	2.00e-73	267.00
IUUC-Fox-038025	Fusarium oxysporum	35.63	5.00e-73	265.00
IUUC-Fso-038344	Fusarium solani	34.29	4.00e-70	256.00
IUUC-Gmo-039643	Gadus morhua	32.87	1.00e-71	261.00
IUUC-Ggr-039816	Gaeumannomyces graminis	33.49	2.00e-72	263.00
IUUC-Gga-040143	Gallus gallus	35.13	3.00e-74	270.00
IUUC-Gac-041665	Gasterosteus aculeatus	34.02	1.00e-72	264.00
IUUC-Gma-043073	Glycine max	32.94	1.00e-72	264.00
IUUC-Ggo-045058	Gorilla gorilla	35.24	5.00e-76	276.00
IUUC-Hsa-046843	Homo sapiens	35.24	7.00e-76	275.00
IUUC-Hvu-047654	Hordeum vulgare	34.63	1.00e-43	167.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	35.24	5.00e-76	275.00
IUUC-Kpa-049232	Komagataella pastoris	34.15	2.00e-72	263.00
IUUC-Lch-050542	Latimeria chalumnae	34.34	1.00e-72	265.00
IUUC-Lpe-051622	Leersia perrieri	34.80	3.00e-75	273.00
IUUC-Loc-052674	Lepisosteus oculatus	34.75	3.00e-76	276.00
IUUC-Lma-053108	Leptosphaeria maculans	35.19	5.00e-75	272.00
IUUC-Laf-053385	Loxodonta africana	34.35	2.00e-74	270.00
IUUC-Mcc-055151	Macaca mulatta	34.78	4.00e-76	276.00
IUUC-Meu-056230	Macropus eugenii	29.82	1.00e-27	114.00
IUUC-Mor-057013	Magnaporthe oryzae	33.72	5.00e-71	259.00
IUUC-Mpo-057530	Magnaporthe poae	33.26	2.00e-71	260.00
IUUC-Mtr-058187	Medicago truncatula	36.45	2.00e-77	280.00
IUUC-Mla-058964	Melampsora laricipopulina	33.77	7.00e-67	245.00
IUUC-Mga-059712	Meleagris gallopavo	34.73	6.00e-72	262.00
IUUC-Mvi-060370	Microbotryum violaceum	34.29	2.00e-66	243.00
IUUC-Mmr-061340	Microcebus murinus	33.86	8.00e-72	262.00
IUUC-Mdo-062978	Monodelphis domestica	34.63	2.00e-76	277.00
IUUC-Mmu-063439	Mus musculus	35.24	1.00e-76	277.00
IUUC-Mac-065129	Musa acuminata	32.58	5.00e-74	269.00
IUUC-Mpu-066548	Mustela putorius furo	30.90	2.00e-56	210.00
IUUC-Mlu-067660	Myotis lucifugus	34.71	5.00e-77	279.00
IUUC-Nfi-068455	Neosartorya fischeri	36.55	3.00e-74	269.00
IUUC-Ncr-068848	Neurospora crassa	35.24	5.00e-76	275.00
IUUC-Nle-069923	Nomascus leucogenys	35.47	3.00e-76	276.00
IUUC-Opr-070279	Ochotona princeps	26.32	4.00e-15	73.20
IUUC-Ont-072234	Oreochromis niloticus	34.32	3.00e-75	273.00
IUUC-Oan-073713	Ornithorhynchus anatinus	28.91	1.00e-21	93.60
IUUC-Ocu-073782	Oryctolagus cuniculus	34.78	6.00e-76	275.00
IUUC-Oba-075161	Oryza barthii	34.34	8.00e-75	271.00
IUUC-Obr-076868	Oryza brachyantha	34.34	5.00e-75	272.00
IUUC-Ogl-077062	Oryza glaberrima	34.34	8.00e-75	271.00
IUUC-Ogu-078308	Oryza glumaepatula	34.34	8.00e-75	271.00
IUUC-Oin-079378	Oryza indica	34.34	8.00e-75	271.00
IUUC-Olo-080638	Oryza longistaminata	33.41	8.00e-67	245.00
IUUC-Oni-082368	Oryza nivara	34.34	8.00e-75	271.00
IUUC-Opu-083628	Oryza punctata	34.34	8.00e-75	271.00
IUUC-Oru-085226	Oryza rufipogon	34.11	2.00e-74	270.00
IUUC-Osa-085368	Oryza sativa	28.88	6.00e-33	131.00
IUUC-Ola-086836	Oryzias latipes	34.02	6.00e-75	272.00
IUUC-Olu-087755	Ostreococcus lucimarinus	33.48	2.00e-70	257.00
IUUC-Oga-088170	Otolemur garnettii	34.48	7.00e-76	275.00
IUUC-Oar-089388	Ovis aries	34.92	8.00e-75	271.00
IUUC-Ptr-090494	Pan troglodytes	35.24	7.00e-76	275.00
IUUC-Pan-091697	Papio anubis	35.24	2.00e-76	277.00
IUUC-Psi-093916	Pelodiscus sinensis	32.49	3.00e-69	253.00
IUUC-Pno-095004	Phaeosphaeria nodorum	34.39	7.00e-66	241.00
IUUC-Ppa-095514	Physcomitrella patens	35.29	7.00e-76	275.00
IUUC-Pfo-097432	Poecilia formosa	33.72	2.00e-75	273.00
IUUC-Pab-098423	Pongo abelii	35.24	1.00e-76	277.00
IUUC-Pop-099649	Populus trichocarpa	34.09	4.00e-74	269.00
IUUC-Pca-100365	Procavia capensis	32.63	2.00e-70	257.00
IUUC-Ppe-101379	Prunus persica	33.56	1.00e-73	267.00
IUUC-Pva-102845	Pteropus vampyrus	35.63	1.00e-75	275.00
IUUC-Pgr-103469	Puccinia graminis	30.49	3.00e-55	207.00
IUUC-Ptt-103980	Puccinia triticina	33.94	2.00e-41	160.00
IUUC-Pte-104111	Pyrenophora teres	34.98	2.00e-72	263.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	34.98	2.00e-72	263.00
IUUC-Rno-105082	Rattus norvegicus	35.09	1.00e-75	274.00
IUUC-Sce-106340	Saccharomyces cerevisiae	32.34	2.00e-72	264.00
IUUC-Sha-106584	Sarcophilus harrisii	34.25	7.00e-77	278.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	35.08	5.00e-72	262.00
IUUC-Spo-108046	Schizosaccharomyces pombe	35.71	9.00e-75	271.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	33.72	4.00e-73	266.00
IUUC-Smo-109548	Selaginella moellendorffii	34.01	2.00e-75	274.00
IUUC-Sit-110242	Setaria italica	34.41	1.00e-72	264.00
IUUC-Sly-111762	Solanum lycopersicum	33.94	7.00e-75	271.00
IUUC-Stu-112156	Solanum tuberosum	33.49	2.00e-73	267.00
IUUC-Sbi-114739	Sorghum bicolor	34.57	7.00e-74	268.00
IUUC-Sre-114951	Sporisorium reilianum	38.78	6.00e-51	192.00
IUUC-Ssc-115510	Sus scrofa	34.55	2.00e-75	273.00
IUUC-Tgu-117234	Taeniopygia guttata	34.83	4.00e-72	262.00
IUUC-Tru-117986	Takifugu rubripes	33.71	2.00e-75	273.00
IUUC-Tsy-119252	Tarsius syrichta	33.87	3.00e-70	257.00
IUUC-Tni-119785	Tetraodon nigroviridis	33.72	3.00e-74	270.00
IUUC-Tca-121222	Theobroma cacao	34.03	3.00e-73	266.00
IUUC-Tre-122243	Trichoderma reesei	34.71	5.00e-73	265.00
IUUC-Tvi-122293	Trichoderma virens	34.25	6.00e-72	262.00
IUUC-Tae-125191	Triticum aestivum	32.88	4.00e-68	249.00
IUUC-Tur-126098	Triticum urartu	32.73	5.00e-66	242.00
IUUC-Tme-127200	Tuber melanosporum	38.07	4.00e-82	296.00
IUUC-Tbe-127568	Tupaia belangeri	32.68	3.00e-25	107.00
IUUC-Ttr-129185	Tursiops truncatus	29.75	3.00e-55	206.00
IUUC-Uma-129353	Ustilago maydis	40.00	7.00e-52	195.00
IUUC-Vda-129768	Verticillium dahliae	36.55	7.00e-78	281.00
IUUC-Vpa-130572	Vicugna pacos	35.01	4.00e-75	273.00
IUUC-Vvi-131555	Vitis vinifera	35.19	7.00e-76	275.00
IUUC-Xtr-132263	Xenopus tropicalis	33.68	3.00e-62	229.00
IUUC-Xma-133925	Xiphophorus maculatus	34.86	1.00e-76	277.00
IUUC-Yli-134384	Yarrowia lipolytica	36.14	7.00e-74	268.00
IUUC-Zma-135616	Zea mays	34.64	1.00e-72	264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence