iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-041037

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger protein 183

Genbank Nucleotide ID

AADN04000381

Gene Name

RNF113A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000000538.5	ENSGALT00000000743.5	ENSGALP00000000742.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-06	27.7	250	287

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlC 45
           C iC+++fk+ p+v+ C H f+++C  q++       +k++rC +C
   Q: 250  CFICRSSFKN-PVVTKCRHYFCESCAlQHY-------RKSQRCYVC 287
           9*********.999***********65888.......99999**** PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MAEEGSVCSF VFKKRGLAAG RGRRKRPSSD QEQESSGEEG STVVRKERRR ETPNPMIQKT 60
RRCTKERPSY ALSSSDDDDP SKEIGVTYKS TRSAKPVGPE DMGATAVYEL DTEKDKDAQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCACTCTG TCCGGCGGCG GCGGCGGAAG ATGGCGGAGG AGGGCTCAGT GTGCAGCTTC 60
GTCTTCAAGA AACGGGGCCT GGCGGCGGGG AGGGGTCGGC GGAAGCGGCC CAGCAGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing

KEGG

gga:419956

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000118	Aegilops tauschii	46.96	2.00e-52	199.00
IUUC-Aml-002002	Ailuropoda melanoleuca	79.18	5.00e-134	470.00
IUUC-Atr-003145	Amborella trichopoda	47.35	6.00e-54	204.00
IUUC-Apl-003440	Anas platyrhynchos	93.75	5.00e-136	476.00
IUUC-Aca-004421	Anolis carolinensis	84.95	2.00e-146	511.00
IUUC-Aly-006121	Arabidopsis lyrata	46.64	3.00e-53	201.00
IUUC-Ath-007493	Arabidopsis thaliana	47.09	9.00e-54	203.00
IUUC-Ago-007731	Ashbya gossypii	43.70	5.00e-30	124.00
IUUC-Acl-008186	Aspergillus clavatus	43.92	7.00e-44	170.00
IUUC-Afl-008484	Aspergillus flavus	40.66	4.00e-39	155.00
IUUC-Afu-008971	Aspergillus fumigatus	44.44	1.00e-44	172.00
IUUC-Ani-009499	Aspergillus nidulans	44.38	1.00e-41	163.00
IUUC-Ang-009717	Aspergillus niger	35.33	8.00e-44	170.00
IUUC-Aor-009898	Aspergillus oryzae	40.66	5.00e-39	154.00
IUUC-Ate-010508	Aspergillus terreus	42.39	3.00e-41	161.00
IUUC-Ame-011925	Astyanax mexicanus	80.74	2.00e-129	454.00
IUUC-Bgr-012259	Blumeria graminis	38.81	2.00e-41	162.00
IUUC-Bta-012490	Bos taurus	74.54	2.00e-139	488.00
IUUC-Bci-013882	Botrytis cinerea	41.18	7.00e-41	160.00
IUUC-Bdi-014084	Brachypodium distachyon	45.89	4.00e-52	197.00
IUUC-Bol-016607	Brassica oleracea	46.85	9.00e-53	200.00
IUUC-Bra-017747	Brassica rapa	47.30	3.00e-53	201.00
IUUC-Cel-018698	Caenorhabditis elegans	48.50	1.00e-69	256.00
IUUC-Cja-019434	Callithrix jacchus	80.07	3.00e-129	454.00
IUUC-Cfa-020902	Canis familiaris	78.08	9.00e-133	466.00
IUUC-Cre-022885	Chlamydomonas reinhardtii	38.43	5.00e-41	160.00
IUUC-Csa-023933	Chlorocebus sabaeus	59.50	1.00e-102	365.00
IUUC-Cho-024587	Choloepus hoffmanni	73.91	6.00e-106	376.00
IUUC-Cin-025328	Ciona intestinalis	75.45	2.00e-107	381.00
IUUC-Csv-026148	Ciona savignyi	75.68	7.00e-106	376.00
IUUC-Cgl-026700	Colletotrichum gloeosporioides	41.51	1.00e-34	139.00
IUUC-Cne-026816	Cryptococcus neoformans	36.86	6.00e-43	167.00
IUUC-Dre-027744	Danio rerio	73.36	6.00e-127	446.00
IUUC-Dse-031155	Dothistroma septosporum	50.35	1.00e-38	153.00
IUUC-Dme-031788	Drosophila melanogaster	57.19	5.00e-103	367.00
IUUC-Ete-033013	Echinops telfairi	81.30	4.00e-127	447.00
IUUC-Eca-033460	Equus caballus	75.29	6.00e-135	473.00
IUUC-Fca-035525	Felis catus	79.51	4.00e-135	473.00
IUUC-Fal-037206	Ficedula albicollis	93.94	5.00e-146	509.00
IUUC-Fox-037959	Fusarium oxysporum	35.96	2.00e-37	149.00
IUUC-Fso-038348	Fusarium solani	32.36	6.00e-41	160.00
IUUC-Gmo-038718	Gadus morhua	72.73	9.00e-128	449.00
IUUC-Ggr-040114	Gaeumannomyces graminis	43.98	2.00e-43	169.00
IUUC-Gac-042103	Gasterosteus aculeatus	76.29	5.00e-131	460.00
IUUC-Gma-043581	Glycine max	47.60	3.00e-58	218.00
IUUC-Ggo-044906	Gorilla gorilla	79.51	1.00e-133	468.00
IUUC-Hsa-047000	Homo sapiens	79.51	1.00e-133	468.00
IUUC-Hvu-047578	Hordeum vulgare	49.12	3.00e-25	106.00
IUUC-Itr-048102	Ictidomys tridecemlineatus	75.81	3.00e-134	471.00
IUUC-Kpa-049320	Komagataella pastoris	39.77	1.00e-35	142.00
IUUC-Lch-050488	Latimeria chalumnae	77.60	4.00e-140	490.00
IUUC-Lpe-051156	Leersia perrieri	42.17	2.00e-48	186.00
IUUC-Loc-052670	Lepisosteus oculatus	79.48	2.00e-132	464.00
IUUC-Lma-053326	Leptosphaeria maculans	40.70	6.00e-38	151.00
IUUC-Laf-053570	Loxodonta africana	76.95	1.00e-138	485.00
IUUC-Mcc-055375	Macaca mulatta	82.29	7.00e-134	469.00
IUUC-Meu-056191	Macropus eugenii	74.92	4.00e-135	474.00
IUUC-Mor-057193	Magnaporthe oryzae	39.30	5.00e-39	154.00
IUUC-Mpo-057603	Magnaporthe poae	42.78	3.00e-41	161.00
IUUC-Mtr-058182	Medicago truncatula	47.60	2.00e-56	213.00
IUUC-Mla-058921	Melampsora laricipopulina	39.64	1.00e-33	135.00
IUUC-Mga-059281	Meleagris gallopavo	99.26	3.00e-162	563.00
IUUC-Mvi-060317	Microbotryum violaceum	43.78	2.00e-38	152.00
IUUC-Mmr-061744	Microcebus murinus	77.59	5.00e-132	463.00
IUUC-Mmu-064400	Mus musculus	82.46	9.00e-134	469.00
IUUC-Mac-065265	Musa acuminata	45.89	4.00e-49	187.00
IUUC-Mpu-066867	Mustela putorius furo	77.93	9.00e-133	466.00
IUUC-Mlu-067828	Myotis lucifugus	81.02	1.00e-131	462.00
IUUC-Nfi-068575	Neosartorya fischeri	42.33	1.00e-40	160.00
IUUC-Ncr-068828	Neurospora crassa	41.94	3.00e-40	159.00
IUUC-Nle-069137	Nomascus leucogenys	79.51	6.00e-134	469.00
IUUC-Ont-071497	Oreochromis niloticus	75.57	6.00e-134	469.00
IUUC-Oan-073182	Ornithorhynchus anatinus	79.55	3.00e-129	454.00
IUUC-Ocu-073949	Oryctolagus cuniculus	74.77	6.00e-132	463.00
IUUC-Oba-075693	Oryza barthii	43.55	2.00e-48	185.00
IUUC-Obr-076128	Oryza brachyantha	41.34	1.00e-47	183.00
IUUC-Ogl-077323	Oryza glaberrima	43.55	2.00e-48	185.00
IUUC-Ogu-078766	Oryza glumaepatula	43.55	2.00e-48	185.00
IUUC-Oin-080054	Oryza indica	43.55	2.00e-48	185.00
IUUC-Olo-080325	Oryza longistaminata	43.12	1.00e-38	153.00
IUUC-Ome-081331	Oryza meridionalis	42.17	1.00e-48	186.00
IUUC-Oni-082786	Oryza nivara	43.55	2.00e-48	185.00
IUUC-Opu-083855	Oryza punctata	43.90	1.00e-48	186.00
IUUC-Oru-084304	Oryza rufipogon	43.55	2.00e-48	185.00
IUUC-Osa-086166	Oryza sativa	42.34	2.00e-48	185.00
IUUC-Ola-086368	Oryzias latipes	70.79	2.00e-123	435.00
IUUC-Olu-087624	Ostreococcus lucimarinus	43.23	2.00e-47	182.00
IUUC-Oga-088080	Otolemur garnettii	73.70	8.00e-134	469.00
IUUC-Oar-089934	Ovis aries	77.35	2.00e-139	488.00
IUUC-Ptr-090827	Pan troglodytes	79.51	1.00e-133	469.00
IUUC-Pan-092245	Papio anubis	82.29	7.00e-134	469.00
IUUC-Psi-093790	Pelodiscus sinensis	91.30	3.00e-148	516.00
IUUC-Pma-094326	Petromyzon marinus	74.10	4.00e-126	443.00
IUUC-Pno-095057	Phaeosphaeria nodorum	44.16	7.00e-39	153.00
IUUC-Ppa-095690	Physcomitrella patens	47.08	8.00e-55	206.00
IUUC-Pfo-097026	Poecilia formosa	75.00	1.00e-132	465.00
IUUC-Pab-098689	Pongo abelii	79.17	1.00e-133	469.00
IUUC-Pca-100687	Procavia capensis	79.02	9.00e-123	432.00
IUUC-Ppe-101155	Prunus persica	46.35	6.00e-56	210.00
IUUC-Pgr-103440	Puccinia graminis	40.44	4.00e-42	165.00
IUUC-Ptt-103893	Puccinia triticina	30.94	6.00e-28	117.00
IUUC-Pte-104377	Pyrenophora teres	46.62	4.00e-39	154.00
IUUC-Pyt-104731	Pyrenophora triticirepentis	46.62	9.00e-39	153.00
IUUC-Rno-105967	Rattus norvegicus	76.07	2.00e-140	491.00
IUUC-Sce-106215	Saccharomyces cerevisiae	46.04	4.00e-38	150.00
IUUC-Sha-107587	Sarcophilus harrisii	71.13	2.00e-130	458.00
IUUC-Sja-107955	Schizosaccharomyces japonicus	40.53	2.00e-39	156.00
IUUC-Spo-108336	Schizosaccharomyces pombe	36.02	3.00e-35	142.00
IUUC-Smo-109109	Selaginella moellendorffii	43.50	3.00e-54	205.00
IUUC-Sit-110234	Setaria italica	44.03	5.00e-50	191.00
IUUC-Sly-111790	Solanum lycopersicum	53.33	7.00e-45	172.00
IUUC-Stu-111994	Solanum tuberosum	40.44	2.00e-58	219.00
IUUC-Sar-113374	Sorex araneus	78.12	2.00e-131	461.00
IUUC-Sbi-114766	Sorghum bicolor	44.81	3.00e-52	198.00
IUUC-Sre-115021	Sporisorium reilianum	45.88	1.00e-47	183.00
IUUC-Ssc-115474	Sus scrofa	77.10	3.00e-134	470.00
IUUC-Tgu-116649	Taeniopygia guttata	94.19	3.00e-171	593.00
IUUC-Tru-117701	Takifugu rubripes	71.75	1.00e-125	442.00
IUUC-Tni-120607	Tetraodon nigroviridis	73.79	1.00e-126	445.00
IUUC-Tca-121278	Theobroma cacao	44.50	6.00e-45	174.00
IUUC-Tre-122006	Trichoderma reesei	37.36	9.00e-34	137.00
IUUC-Tvi-122670	Trichoderma virens	39.34	1.00e-38	152.00
IUUC-Tae-122716	Triticum aestivum	46.96	2.00e-52	198.00
IUUC-Tur-126208	Triticum urartu	45.27	2.00e-52	199.00
IUUC-Tme-126908	Tuber melanosporum	43.90	1.00e-38	153.00
IUUC-Tbe-127394	Tupaia belangeri	81.25	2.00e-133	468.00
IUUC-Uma-129339	Ustilago maydis	37.92	8.00e-50	190.00
IUUC-Vda-129895	Verticillium dahliae	39.38	9.00e-41	160.00
IUUC-Vpa-130519	Vicugna pacos	77.66	3.00e-126	444.00
IUUC-Vvi-131382	Vitis vinifera	38.12	7.00e-53	200.00
IUUC-Xtr-131923	Xenopus tropicalis	76.58	3.00e-137	481.00
IUUC-Xma-133705	Xiphophorus maculatus	72.78	1.00e-133	469.00
IUUC-Yli-134518	Yarrowia lipolytica	50.71	3.00e-37	148.00
IUUC-Zma-135029	Zea mays	46.48	5.00e-46	177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence