iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058445

Ensembl Protein ID

AES71113

UniProt Accession

B7FK44; B7FK44_MEDTR

Genbank Protein ID

ACJ85129.1; AES71113.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Genbank Nucleotide ID

BT052462; CM001219

Gene Name

MTR_3g070190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g070190	AES71113	AES71113

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	40.68	8.00e-57	218.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MASTNRTVLQ FSSSSSSSQS LSAKVHPLVV FNICDCYVRR PDQAERVIGT LLGSVLPDGT 60
VDIRNSYAVP HNESVDQVAL DIEYHHNMLL SHQKVNQKEI IVGWYSTGLG VTGGSALIHE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGATCAGCCC ACATGTGAAA AACCCTAGCG AAACAATCAC ACTCATTCTC TTCTATTGCT 60
TCTTCTTCTT CTTCTTCTTC TTCACACGCC TTGTGAGCAG CGAAGGTGTT GAATCCAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

mtr:MTR_3g070190

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	67.47	1.00e-106	379.00
IUUC-Aml-001527	Ailuropoda melanoleuca	40.68	1.00e-58	219.00
IUUC-Atr-002686	Amborella trichopoda	73.26	8.00e-109	385.00
IUUC-Apl-003977	Anas platyrhynchos	39.09	3.00e-46	177.00
IUUC-Aca-004335	Anolis carolinensis	40.68	4.00e-59	220.00
IUUC-Aly-005945	Arabidopsis lyrata	76.63	3.00e-121	427.00
IUUC-Ath-007045	Arabidopsis thaliana	75.95	2.00e-120	424.00
IUUC-Acl-008365	Aspergillus clavatus	36.36	5.00e-45	174.00
IUUC-Afl-008742	Aspergillus flavus	37.36	1.00e-44	173.00
IUUC-Afu-009030	Aspergillus fumigatus	36.73	1.00e-45	176.00
IUUC-Ani-009212	Aspergillus nidulans	36.36	1.00e-44	172.00
IUUC-Ang-009712	Aspergillus niger	36.36	3.00e-44	171.00
IUUC-Aor-009885	Aspergillus oryzae	37.36	4.00e-46	177.00
IUUC-Ate-010315	Aspergillus terreus	36.00	3.00e-43	167.00
IUUC-Ame-010801	Astyanax mexicanus	47.19	2.00e-19	89.00
IUUC-Bgr-011982	Blumeria graminis	35.97	2.00e-43	169.00
IUUC-Bta-012804	Bos taurus	40.68	2.00e-58	218.00
IUUC-Bci-013891	Botrytis cinerea	34.17	6.00e-37	147.00
IUUC-Bdi-014328	Brachypodium distachyon	72.18	4.00e-108	383.00
IUUC-Bol-015446	Brassica oleracea	77.13	3.00e-123	433.00
IUUC-Bra-016862	Brassica rapa	76.45	3.00e-122	430.00
IUUC-Cel-018171	Caenorhabditis elegans	26.83	4.00e-27	114.00
IUUC-Cja-019335	Callithrix jacchus	40.68	2.00e-58	219.00
IUUC-Cfa-020138	Canis familiaris	40.30	3.00e-58	218.00
IUUC-Cpo-022109	Cavia porcellus	38.75	3.00e-47	181.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	41.91	8.00e-61	226.00
IUUC-Csa-023994	Chlorocebus sabaeus	40.68	1.00e-58	219.00
IUUC-Cho-024351	Choloepus hoffmanni	31.56	7.00e-33	134.00
IUUC-Cin-025801	Ciona intestinalis	37.88	2.00e-52	198.00
IUUC-Csv-025805	Ciona savignyi	39.39	2.00e-53	201.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	31.77	2.00e-35	142.00
IUUC-Cne-026868	Cryptococcus neoformans	33.58	2.00e-29	122.00
IUUC-Cme-027328	Cyanidioschyzon merolae	27.33	1.00e-18	86.70
IUUC-Dre-028085	Danio rerio	40.68	8.00e-61	226.00
IUUC-Dno-030099	Dasypus novemcinctus	40.68	2.00e-58	218.00
IUUC-Dor-030324	Dipodomys ordii	36.50	3.00e-48	184.00
IUUC-Dse-031314	Dothistroma septosporum	37.18	3.00e-45	174.00
IUUC-Dme-031926	Drosophila melanogaster	38.58	3.00e-50	191.00
IUUC-Ete-032569	Echinops telfairi	40.45	4.00e-53	200.00
IUUC-Eca-033502	Equus caballus	38.78	8.00e-53	200.00
IUUC-Eeu-034883	Erinaceus europaeus	32.97	1.00e-27	115.00
IUUC-Fca-035873	Felis catus	40.68	1.00e-58	219.00
IUUC-Fal-036921	Ficedula albicollis	40.30	2.00e-57	214.00
IUUC-Fox-037765	Fusarium oxysporum	31.18	4.00e-30	124.00
IUUC-Fso-038240	Fusarium solani	30.69	6.00e-29	120.00
IUUC-Gmo-038864	Gadus morhua	39.54	8.00e-59	219.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.75	1.00e-28	119.00
IUUC-Gga-040952	Gallus gallus	40.30	4.00e-57	214.00
IUUC-Gac-041677	Gasterosteus aculeatus	41.44	6.00e-62	229.00
IUUC-Gma-043061	Glycine max	90.66	2.00e-130	457.00
IUUC-Ggo-045591	Gorilla gorilla	40.68	1.00e-58	219.00
IUUC-Hsa-046860	Homo sapiens	40.68	1.00e-58	219.00
IUUC-Hvu-047410	Hordeum vulgare	70.27	2.00e-62	229.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	41.06	4.00e-59	221.00
IUUC-Lch-049410	Latimeria chalumnae	38.92	1.00e-34	138.00
IUUC-Lpe-051102	Leersia perrieri	77.13	8.00e-113	399.00
IUUC-Loc-052016	Lepisosteus oculatus	37.83	6.00e-49	186.00
IUUC-Lma-053157	Leptosphaeria maculans	35.87	5.00e-45	174.00
IUUC-Laf-054568	Loxodonta africana	40.68	2.00e-58	218.00
IUUC-Mcc-054613	Macaca mulatta	40.68	1.00e-58	219.00
IUUC-Meu-056832	Macropus eugenii	32.23	6.00e-17	80.10
IUUC-Mor-057104	Magnaporthe oryzae	30.47	3.00e-30	125.00
IUUC-Mla-059038	Melampsora laricipopulina	30.18	1.00e-30	126.00
IUUC-Mga-059548	Meleagris gallopavo	39.21	1.00e-48	185.00
IUUC-Mvi-060520	Microbotryum violaceum	25.68	1.00e-18	86.30
IUUC-Mdo-062376	Monodelphis domestica	39.16	1.00e-56	213.00
IUUC-Mmu-063254	Mus musculus	41.06	3.00e-59	221.00
IUUC-Mac-065635	Musa acuminata	68.10	1.00e-106	378.00
IUUC-Mpu-066314	Mustela putorius furo	40.68	1.00e-58	219.00
IUUC-Mlu-067512	Myotis lucifugus	40.68	5.00e-59	220.00
IUUC-Nfi-068262	Neosartorya fischeri	36.73	8.00e-46	176.00
IUUC-Ncr-068872	Neurospora crassa	30.82	5.00e-32	130.00
IUUC-Nle-070118	Nomascus leucogenys	40.68	1.00e-58	219.00
IUUC-Opr-071228	Ochotona princeps	39.65	2.00e-50	191.00
IUUC-Ont-072600	Oreochromis niloticus	39.92	7.00e-61	226.00
IUUC-Oan-073584	Ornithorhynchus anatinus	38.77	8.00e-50	189.00
IUUC-Ocu-074542	Oryctolagus cuniculus	40.68	3.00e-59	221.00
IUUC-Oba-075923	Oryza barthii	78.20	2.00e-116	410.00
IUUC-Obr-076313	Oryza brachyantha	77.52	5.00e-112	396.00
IUUC-Ogl-076932	Oryza glaberrima	78.20	2.00e-116	410.00
IUUC-Ogu-078152	Oryza glumaepatula	78.20	2.00e-116	410.00
IUUC-Oin-079528	Oryza indica	78.20	2.00e-116	410.00
IUUC-Olo-080401	Oryza longistaminata	78.20	2.00e-116	410.00
IUUC-Ome-081553	Oryza meridionalis	77.82	6.00e-116	409.00
IUUC-Oni-082090	Oryza nivara	78.20	3.00e-116	410.00
IUUC-Opu-083583	Oryza punctata	79.46	2.00e-114	404.00
IUUC-Oru-084492	Oryza rufipogon	78.20	2.00e-116	410.00
IUUC-Osa-085383	Oryza sativa	78.20	2.00e-116	410.00
IUUC-Ola-086835	Oryzias latipes	41.06	1.00e-62	232.00
IUUC-Olu-087716	Ostreococcus lucimarinus	35.96	4.00e-42	164.00
IUUC-Oga-088886	Otolemur garnettii	41.06	4.00e-59	221.00
IUUC-Oar-090079	Ovis aries	40.68	2.00e-58	218.00
IUUC-Ptr-091457	Pan troglodytes	40.68	1.00e-58	219.00
IUUC-Pan-092317	Papio anubis	37.36	1.00e-34	139.00
IUUC-Psi-093129	Pelodiscus sinensis	37.74	4.00e-50	191.00
IUUC-Pma-094488	Petromyzon marinus	42.21	2.00e-62	231.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.87	2.00e-46	179.00
IUUC-Ppa-095341	Physcomitrella patens	60.15	5.00e-99	353.00
IUUC-Pfo-096286	Poecilia formosa	39.54	3.00e-60	224.00
IUUC-Pab-097765	Pongo abelii	40.68	1.00e-58	219.00
IUUC-Pop-099131	Populus trichocarpa	83.97	1.00e-131	461.00
IUUC-Pca-100524	Procavia capensis	33.19	2.00e-35	141.00
IUUC-Ppe-101934	Prunus persica	82.64	3.00e-137	480.00
IUUC-Pva-102577	Pteropus vampyrus	41.06	3.00e-59	221.00
IUUC-Pgr-103521	Puccinia graminis	30.36	7.00e-32	130.00
IUUC-Pte-104304	Pyrenophora teres	36.23	3.00e-47	181.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	36.23	7.00e-47	180.00
IUUC-Rno-105717	Rattus norvegicus	41.06	2.00e-59	221.00
IUUC-Sha-107190	Sarcophilus harrisii	39.00	3.00e-54	204.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	31.88	6.00e-38	150.00
IUUC-Spo-108355	Schizosaccharomyces pombe	34.00	2.00e-40	158.00
IUUC-Smo-109374	Selaginella moellendorffii	63.91	9.00e-106	375.00
IUUC-Sit-110119	Setaria italica	75.47	5.00e-114	402.00
IUUC-Sly-111570	Solanum lycopersicum	77.78	6.00e-112	396.00
IUUC-Stu-112308	Solanum tuberosum	76.74	4.00e-120	423.00
IUUC-Sar-113515	Sorex araneus	45.78	1.00e-16	78.60
IUUC-Sbi-114605	Sorghum bicolor	75.09	4.00e-113	400.00
IUUC-Sre-114906	Sporisorium reilianum	34.59	4.00e-41	160.00
IUUC-Tgu-117087	Taeniopygia guttata	39.65	2.00e-48	185.00
IUUC-Tru-117700	Takifugu rubripes	41.83	2.00e-63	234.00
IUUC-Tni-120470	Tetraodon nigroviridis	40.30	5.00e-61	226.00
IUUC-Tca-121109	Theobroma cacao	81.94	5.00e-120	423.00
IUUC-Tre-122095	Trichoderma reesei	31.07	2.00e-29	122.00
IUUC-Tvi-122580	Trichoderma virens	30.71	9.00e-29	120.00
IUUC-Tae-125129	Triticum aestivum	73.68	1.00e-112	398.00
IUUC-Tur-126658	Triticum urartu	66.17	4.00e-103	366.00
IUUC-Tme-127043	Tuber melanosporum	35.07	5.00e-43	167.00
IUUC-Tbe-127927	Tupaia belangeri	40.68	1.00e-58	219.00
IUUC-Ttr-129231	Tursiops truncatus	40.68	8.00e-59	219.00
IUUC-Uma-129578	Ustilago maydis	34.59	3.00e-40	157.00
IUUC-Vda-129730	Verticillium dahliae	31.41	2.00e-34	139.00
IUUC-Vvi-130968	Vitis vinifera	81.18	2.00e-125	440.00
IUUC-Xtr-132203	Xenopus tropicalis	39.92	3.00e-57	214.00
IUUC-Xma-133972	Xiphophorus maculatus	39.54	3.00e-60	224.00
IUUC-Yli-134553	Yarrowia lipolytica	31.95	9.00e-33	133.00
IUUC-Zma-134941	Zea mays	73.58	2.00e-103	368.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence