iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017302

Ensembl Protein ID

Bra007394.1-P

UniProt Accession

M4CT52; M4CT52_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007394	Bra007394.1	Bra007394.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.30e-08	33.3	367	404

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e+++++lv+MGF+r ++  aL+aa+ +l++Ave L++
   Q: 367  SEEQIQKLVAMGFERTQVEVALAAADDDLNVAVEILMS 404
           79**********************************97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRPNIVTEAG VQTRVSQWWN AIPFLTSSVV VVCGIIYLIC LLTGYDSFYE VCFLPSAILS 60
RFQVYRFYTA ILFHGSMLHV LFNMMALVPM GSELERIMGS VRLFYLTILL ATTNAVLHLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA ACATTGTTAC CGAGGTTAGA TCTGCTAAAT CTCCCCCTTC TGCTCAACTA 60
TTTTCTTGAA TCGTCATCAC AAATCGCCGA GAAGCTCTGC TAGTCAACAA GAGCTATGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003104	Amborella trichopoda	58.81	7.00e-137	480.00
IUUC-Aca-004494	Anolis carolinensis	40.00	4.00e-03	35.40
IUUC-Aly-006262	Arabidopsis lyrata	90.69	0.00e+00	679.00
IUUC-Ath-006650	Arabidopsis thaliana	91.23	0.00e+00	672.00
IUUC-Afl-008583	Aspergillus flavus	25.93	3.00e-06	45.10
IUUC-Ame-011360	Astyanax mexicanus	43.48	4.50e-01	28.50
IUUC-Bgr-012264	Blumeria graminis	24.02	2.00e-08	52.40
IUUC-Bci-013845	Botrytis cinerea	25.19	2.00e-09	55.80
IUUC-Bdi-014166	Brachypodium distachyon	60.24	2.00e-135	475.00
IUUC-Bol-015488	Brassica oleracea	98.24	0.00e+00	762.00
IUUC-Cre-022648	Chlamydomonas reinhardtii	41.20	3.00e-38	152.00
IUUC-Cme-027293	Cyanidioschyzon merolae	29.95	2.00e-14	73.60
IUUC-Dse-031546	Dothistroma septosporum	25.70	3.00e-07	48.10
IUUC-Fox-037841	Fusarium oxysporum	27.52	1.00e-05	42.70
IUUC-Fso-038300	Fusarium solani	28.14	5.00e-10	57.40
IUUC-Gma-043194	Glycine max	70.34	2.00e-158	551.00
IUUC-Hvu-047778	Hordeum vulgare	59.08	2.00e-133	468.00
IUUC-Itr-048333	Ictidomys tridecemlineatus	25.34	4.00e-05	42.00
IUUC-Lch-049560	Latimeria chalumnae	29.51	1.00e-05	43.90
IUUC-Lpe-051525	Leersia perrieri	60.29	3.00e-143	500.00
IUUC-Mtr-058025	Medicago truncatula	68.63	3.00e-158	551.00
IUUC-Mac-064802	Musa acuminata	61.11	5.00e-140	490.00
IUUC-Oba-075871	Oryza barthii	56.80	8.00e-121	426.00
IUUC-Obr-076568	Oryza brachyantha	59.76	7.00e-143	499.00
IUUC-Ogl-077534	Oryza glaberrima	58.98	6.00e-130	456.00
IUUC-Ogu-078204	Oryza glumaepatula	56.55	1.00e-120	425.00
IUUC-Oin-079209	Oryza indica	58.98	6.00e-130	456.00
IUUC-Olo-080827	Oryza longistaminata	45.63	3.00e-37	148.00
IUUC-Oni-082642	Oryza nivara	51.70	7.00e-104	370.00
IUUC-Opu-083685	Oryza punctata	52.02	7.00e-113	400.00
IUUC-Oru-085021	Oryza rufipogon	51.70	6.00e-104	370.00
IUUC-Osa-086297	Oryza sativa	58.98	6.00e-130	456.00
IUUC-Olu-087599	Ostreococcus lucimarinus	31.30	6.00e-26	111.00
IUUC-Pno-095121	Phaeosphaeria nodorum	23.49	4.00e-07	47.00
IUUC-Ppa-095438	Physcomitrella patens	45.28	6.00e-95	340.00
IUUC-Pop-099200	Populus trichocarpa	70.24	5.00e-162	563.00
IUUC-Ppe-101907	Prunus persica	67.33	8.00e-160	556.00
IUUC-Sha-107118	Sarcophilus harrisii	41.94	5.70e-01	27.70
IUUC-Sja-107839	Schizosaccharomyces japonicus	27.89	6.00e-06	44.30
IUUC-Ssl-108652	Sclerotinia sclerotiorum	25.28	3.00e-09	55.50
IUUC-Smo-109633	Selaginella moellendorffii	47.26	2.00e-90	325.00
IUUC-Sit-110586	Setaria italica	61.03	8.00e-144	503.00
IUUC-Sly-111682	Solanum lycopersicum	65.29	1.00e-144	505.00
IUUC-Stu-112146	Solanum tuberosum	65.86	1.00e-144	505.00
IUUC-Sbi-114385	Sorghum bicolor	60.54	1.00e-144	505.00
IUUC-Ssc-115544	Sus scrofa	28.74	7.00e-11	61.20
IUUC-Tca-120985	Theobroma cacao	67.47	3.00e-165	574.00
IUUC-Tvi-122530	Trichoderma virens	27.54	2.00e-08	52.40
IUUC-Tae-125293	Triticum aestivum	60.05	4.00e-135	474.00
IUUC-Tur-126741	Triticum urartu	64.36	5.00e-72	264.00
IUUC-Ttr-128782	Tursiops truncatus	28.85	2.00e-11	62.80
IUUC-Vvi-131200	Vitis vinifera	66.75	7.00e-151	526.00
IUUC-Yli-134620	Yarrowia lipolytica	28.82	5.00e-11	61.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence