iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121427

Ensembl Protein ID

EOY09522

UniProt Accession

A0A061EXJ4; A0A061EXJ4_THECC

Genbank Protein ID

EOY09520.1; EOY09521.1; EOY09522.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001883; CM001883; CM001883

Gene Name

TCM_024937

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_024937	EOY09522	EOY09522

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-08	36.1	132	188
E3 activity/RING/RING	1.30e-06	29.7	135	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPnl 59
           +f C I l+l r+Pvv+++G+ +  s++ +wl   s+ k+cPv++ ++t ++l+P +
   Q: 132  FFDCNICLDLAREPVVTCCGHLFCWSCLYRWLhvHSDAKECPVCKGEVTAKTLTPIY 188
           79******************************87777779***************86 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  ++ p+v+ CgH+f+ +Cl++w    ++ s +  CP+C+
   Q: 135  CNICLDLARE-PVVTCCGHLFCWSCLYRW---LHVHSDAKECPVCK 176
           99****8877.999***************...556899999****7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAEETTDTMN LDLNLGPAPE TGSGSVSNES LNWDDLVDNP FDRIREAVRR RRWRWQQVEI 60
PTATQNLSVE LDQFMGNSGN VSTLQAGEGS VAPEERTSDV PKACENTNGF LEDEVSEKKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAATTTA TTTTCCCAAT CTTCTCACTA AACAGATGAA AGCTGACTGA CCCAACAAGA 60
TAACAATCCA TGGCGAGTCA ACTTGAGCCA ACTCAACTCA GAAACTGCTC CCACCATCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000500	Aegilops tauschii	50.43	9.00e-32	129.00
IUUC-Atr-002678	Amborella trichopoda	47.47	8.00e-37	147.00
IUUC-Aly-006126	Arabidopsis lyrata	55.04	2.00e-109	388.00
IUUC-Ath-007143	Arabidopsis thaliana	54.30	2.00e-108	385.00
IUUC-Bgr-012267	Blumeria graminis	42.55	6.00e-09	55.50
IUUC-Bdi-014503	Brachypodium distachyon	33.62	5.00e-35	141.00
IUUC-Bol-015310	Brassica oleracea	51.83	3.00e-102	364.00
IUUC-Bra-017049	Brassica rapa	52.32	3.00e-103	367.00
IUUC-Cho-025025	Choloepus hoffmanni	41.67	1.00e-07	51.20
IUUC-Cgl-026743	Colletotrichum gloeosporioides	44.23	2.00e-09	55.80
IUUC-Fso-038195	Fusarium solani	40.26	2.00e-11	62.80
IUUC-Gma-042913	Glycine max	63.74	3.00e-130	457.00
IUUC-Hvu-047148	Hordeum vulgare	47.97	2.00e-32	132.00
IUUC-Lpe-051015	Leersia perrieri	32.84	8.00e-34	137.00
IUUC-Mtr-057874	Medicago truncatula	55.36	4.00e-122	430.00
IUUC-Mvi-060316	Microbotryum violaceum	52.63	2.00e-13	68.60
IUUC-Mac-064953	Musa acuminata	45.27	5.00e-36	144.00
IUUC-Oba-075089	Oryza barthii	48.18	5.00e-34	138.00
IUUC-Obr-076527	Oryza brachyantha	53.04	2.00e-33	135.00
IUUC-Ogl-077589	Oryza glaberrima	48.18	5.00e-34	138.00
IUUC-Ogu-078102	Oryza glumaepatula	51.18	5.00e-34	137.00
IUUC-Oin-079384	Oryza indica	51.18	4.00e-34	138.00
IUUC-Olo-080296	Oryza longistaminata	51.79	6.00e-33	134.00
IUUC-Ome-081120	Oryza meridionalis	51.79	8.00e-33	134.00
IUUC-Oni-082837	Oryza nivara	51.18	4.00e-34	138.00
IUUC-Opu-083935	Oryza punctata	51.94	6.00e-36	144.00
IUUC-Oru-084846	Oryza rufipogon	51.18	4.00e-34	138.00
IUUC-Osa-085750	Oryza sativa	51.18	4.00e-34	138.00
IUUC-Olu-087623	Ostreococcus lucimarinus	41.27	3.00e-19	87.00
IUUC-Ppa-095235	Physcomitrella patens	68.75	2.00e-27	116.00
IUUC-Pop-099819	Populus trichocarpa	64.71	7.00e-140	489.00
IUUC-Ppe-101193	Prunus persica	70.67	3.00e-122	430.00
IUUC-Smo-109079	Selaginella moellendorffii	50.40	2.00e-27	116.00
IUUC-Sit-110715	Setaria italica	48.63	2.00e-34	139.00
IUUC-Sly-111147	Solanum lycopersicum	58.47	2.00e-109	388.00
IUUC-Stu-112419	Solanum tuberosum	57.14	4.00e-110	390.00
IUUC-Sar-113047	Sorex araneus	39.13	1.00e-07	52.80
IUUC-Sbi-114164	Sorghum bicolor	47.02	1.00e-34	140.00
IUUC-Tae-125367	Triticum aestivum	54.46	3.00e-33	135.00
IUUC-Tur-126535	Triticum urartu	54.46	1.00e-33	136.00
IUUC-Vvi-131195	Vitis vinifera	64.66	2.00e-115	407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence