iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G34850	GLYMA06G34850.3	GLYMA06G34850.3
GLYMA06G34850	GLYMA06G34850.4	GLYMA06G34850.4
GLYMA06G34850	GLYMA06G34850.5	GLYMA06G34850.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.70e-09	37.9	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++w+HpaC+++++ee ++ ++ + C++C+s
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWYHPACMGMTIEEAKKLDH-FVCSECSS 188
           78.7*****************************888888887.******86 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAKTRPGRKD VDSYTIRGTN KIVRAGDCVL MRPSDTSKPP YVARVEMIEQ DNRNNVKVRV 60
RWYYRPEESI GGRRQFHGAK ELFLSDHYDV QSAHTIEGKC VVHSFKNYTK LENVGAEDYY 120

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Nucleotide Sequence
(Fasta)

TGCTTAGCGC AGATCTCAGG GCCAAAAAGT TACTACGAAA ACGGTCAAAT GTAGTGAACC 60
CACCAAGAAT CCCCGTTGCA TTCCCAAAAA ATCACTGTAA TAAAATCACA GGCGAAGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

gmx:100778353

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012210	Blumeria graminis	49.09	7.00e-09	55.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence